lineage | Count |
---|---|
38 | |
lineage4 | 43 |
lineage2.1 | 1 |
lineage4.9 | 10 |
lineage4.1.1.2 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.2.2.2 | 1 |
lineage2.2.1 | 5 |
lineage4.1.2 | 1 |
La1.8.1 | 1 |
lineage4;lineage3.1 | 1 |
lineage2.2 | 3 |
La1 | 1 |
lineage4.3.4 | 1 |
lineage1.1.3.1 | 1 |
lineage2.2.1.2 | 2 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.2.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 115 |
ID | Drug resistance | Lineage | Country iso2 | ERR158583 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | SRR3675502 | Other | None | ERR181887 | HR-TB | None | ERR4819051 | Other | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212125 | HR-TB | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR3675550 | Other | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR1035162 | Other | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341418 | Other | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR5535933 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6511621 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6046492 | Other | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | ERR4831117 | HR-TB | None | ERR502889 | Other | None | ERR1063862 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323045 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR1063858 | HR-TB | None | ERR369151 | Sensitive | lineage4.9 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3439432 | Other | None | ERR3445503 | HR-TB | None | ERR349296 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797043 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR3797060 | Other | La1.8.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR4188247 | HR-TB | None | SRR1180996 | HR-TB | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR736834 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4811493 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR21677880 | Sensitive | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None |
---|