EBG00000313339 - n.179A>G
Drug resistance types
82 Sensitive
4 RR-TB
60 HR-TB
106 MDR-TB
15 Pre-XDR-TB
1 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 65 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2.2.1 | 153 |
| lineage4.3.3 | 5 |
| lineage4.3.4.1 | 5 |
| La3;lineage4.9 | 9 |
| lineage2.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.6.1.2 | 2 |
| lineage4.3.3;lineage4.3.4.2 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.3.2 | 3 |
| La1.7;lineage4.9 | 4 |
| lineage4.1.2.1 | 8 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2 | 4 |
| La1.2.BCG | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.2.1 | 5 |
| lineage4.4.1.2 | 2 |
| lineage2.2 | 1 |
| La3;lineage4 | 1 |
| lineage4.1.1.3 | 2 |
| La1.7.1;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.8 | 2 |
| lineage1;lineage4.9 | 1 |
| La1.2;La1.8.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La3;lineage4.3.4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.1.1 | 1 |
| lineage4 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 307 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR387051 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR12080318 | MDR-TB | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR12080339 | MDR-TB | lineage2.2.1 | None | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | SRR12080325 | MDR-TB | lineage2.2.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR11068796 | Sensitive | lineage2.2.1 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR13266212 | Sensitive | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR11043912 | Sensitive | lineage2.2.1 | None | SRR12080268 | MDR-TB | lineage2.2.1 | None | SRR30182764 | Sensitive | lineage2.2.1 | None | ERR13265996 | Sensitive | lineage2.2.1 | None | ERR13265063 | MDR-TB | lineage2.2.1 | None | ERR13265969 | Sensitive | lineage2.2.1 | None | ERR13266294 | Sensitive | lineage2.2.1 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR2124081 | MDR-TB | lineage4.6.1.2 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR12080336 | MDR-TB | lineage2.2.1 | None | SRR16156817 | Other | lineage4.9 | None | SRR12080331 | MDR-TB | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR1034911 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | pt | ERR161037 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR13266288 | Sensitive | lineage2.2.1 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR1213930 | Other | lineage4.3.2 | pe | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR12080306 | MDR-TB | lineage2.2.1 | None | SRR30182370 | Sensitive | lineage2.2.1 | None | SRR26112695 | Sensitive | lineage2.2.1 | None | ERR8773589 | MDR-TB | lineage2.2.1 | None | SRR12080283 | MDR-TB | lineage2.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR13265725 | Sensitive | lineage2.2.1 | None | ERR233375 | Sensitive | lineage2.2.1 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR12080300 | MDR-TB | lineage2.2.1 | None | SRR12080320 | MDR-TB | lineage2.2.1 | None | SRR12080329 | MDR-TB | lineage2.2.1 | None | SRR12080328 | MDR-TB | lineage2.2.1 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR8237323 | MDR-TB | lineage2.2.1 | np | SRR6046259 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR13266324 | Sensitive | lineage2.2.1 | None | SRR12080284 | MDR-TB | lineage2.2.1 | None | SRR30182445 | Sensitive | lineage2.2.1 | None | ERR1035315 | Pre-XDR-TB | lineage4.3.4.1 | br | SRR15364436 | HR-TB | lineage2.2.1 | None | SRR12080323 | MDR-TB | lineage2.2.1 | None | SRR22249502 | Sensitive | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR12080296 | MDR-TB | lineage2.2.1 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | SRR7645971 | Other | lineage2.2.1 | None | SRR28046041 | MDR-TB | lineage2.2.1 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR1035317 | RR-TB | lineage4.3.4.2 | br | SRR19295647 | Sensitive | lineage4.9 | None | SRR12080277 | HR-TB | lineage2.2.1 | None | SRR12080310 | HR-TB | lineage2.2.1 | None | SRR8237377 | Sensitive | lineage2.2.1 | ch | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR13265651 | Sensitive | lineage2.2.1 | None | SRR12080307 | MDR-TB | lineage2.2.1 | None | SRR12080312 | MDR-TB | lineage2.2.1 | None | ERR1035353 | MDR-TB | lineage4.4.1.2 | br | ERR4819241 | Other | lineage4.9 | None | SRR12080298 | MDR-TB | lineage2.2.1 | None | SRR21733168 | HR-TB | lineage2.2.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR12080303 | MDR-TB | lineage2.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | ERR4797241 | Sensitive | lineage2.2.1 | in | SRR12080305 | MDR-TB | lineage2.2.1 | None | SRR12080315 | MDR-TB | lineage2.2.1 | None | ERR1213899 | Other | lineage4.1.1.3 | pe | SRR21732802 | Sensitive | lineage2.2.1 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR12080289 | MDR-TB | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR12080316 | MDR-TB | lineage2.2.1 | None | SRR21732993 | HR-TB | lineage2.2.1 | None | SRR25827763 | Other | lineage2.2.1 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR12080271 | MDR-TB | lineage2.2.1 | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR13265069 | Sensitive | lineage2.2.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR30182410 | Other | lineage2.2.1 | None | ERR13265202 | Sensitive | lineage2.2.1 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR12080299 | HR-TB | lineage2.2.1 | None | SRR12080330 | MDR-TB | lineage2.2.1 | None | SRR21714039 | Sensitive | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR13265724 | Sensitive | lineage2.2.1 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR13265597 | Sensitive | lineage2.2.1 | None | SRR12080342 | MDR-TB | lineage2.2.1 | None | SRR12080344 | HR-TB | lineage2.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR12080282 | MDR-TB | lineage2.2.1 | None | SRR12080324 | MDR-TB | lineage2.2.1 | None | SRR12080280 | MDR-TB | lineage2.2.1 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR1213928 | MDR-TB | lineage4.3.3 | pe | ERR3283032 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR12080322 | MDR-TB | lineage2.2.1 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1213900 | RR-TB | lineage4.1.2.1 | pe | ERR13265883 | Sensitive | lineage2.2.1 | None | SRR28045249 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR4800690 | Pre-XDR-TB | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR12080326 | MDR-TB | lineage2.2.1 | None | ERR473332 | Other | lineage4.9 | None | SRR12080341 | MDR-TB | lineage2.2.1 | None | ERR13265860 | Sensitive | lineage2.2.1 | None | SRR22137407 | Pre-XDR-TB | lineage2.2.1 | None | SRR12080274 | MDR-TB | lineage2.2.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR13266014 | Sensitive | lineage2.2.1 | None | SRR12080309 | MDR-TB | lineage2.2.1 | None | SRR12080302 | MDR-TB | lineage2.2.1 | None | SRR12080281 | MDR-TB | lineage2.2.1 | None | SRR12080319 | MDR-TB | lineage2.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR12080301 | MDR-TB | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR12080334 | MDR-TB | lineage2.2.1 | None | SRR28044666 | XDR-TB | lineage2.2.1 | None | SRR28045250 | Pre-XDR-TB | lineage2.2.1 | None | SRR12080276 | MDR-TB | lineage2.2.1 | None | SRR28045025 | MDR-TB | lineage2.2.1 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR27450251 | Sensitive | lineage2.2.1 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR12080294 | MDR-TB | lineage2.2.1 | None | SRR28860141 | MDR-TB | lineage2.2.1 | None | SRR8237332 | HR-TB | lineage2.2.1 | np | ERR13266365 | Sensitive | lineage2.2.1 | None | ERR1035318 | Pre-XDR-TB | lineage4.3.4.1 | br | SRR12080332 | HR-TB | lineage2.2.1 | None | SRR22249635 | Sensitive | lineage2.2.1 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR12080293 | MDR-TB | lineage2.2.1 | None | SRR12080273 | MDR-TB | lineage2.2.1 | None | SRR12080269 | HR-TB | lineage2.2.1 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | SRR12080292 | MDR-TB | lineage2.2.1 | None | ERR4797002 | Sensitive | lineage2.2.1 | in | SRR6044875 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1213874 | MDR-TB | lineage2.2.1 | kr | SRR3105738 | HR-TB | lineage2.2.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR12080308 | MDR-TB | lineage2.2.1 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | SRR12080337 | MDR-TB | lineage2.2.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR28045579 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | SRR12080278 | MDR-TB | lineage2.2.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR13265095 | Sensitive | lineage2.2.1 | None | SRR21732776 | Sensitive | lineage2.2.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645927 | Other | lineage4.8 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR12080313 | MDR-TB | lineage2.2.1 | None | SRR12080343 | HR-TB | lineage2.2.1 | None | SRR12080311 | MDR-TB | lineage2.2.1 | None | SRR22249538 | Sensitive | lineage2.2.1 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR29097058 | Other | lineage4.9 | None | SRR27241222 | Pre-XDR-TB | lineage2.2.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR12080317 | MDR-TB | lineage2.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR13265529 | Sensitive | lineage2.2.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR29055500 | Sensitive | lineage2.2.1 | None | ERR1035293 | MDR-TB | lineage4.3.4.2 | br | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR12080340 | MDR-TB | lineage2.2.1 | None | ERR13266208 | Sensitive | lineage2.2.1 | None | ERR9892002 | Sensitive | lineage2.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | ERR3283021 | HR-TB | lineage4.9 | None | SRR12080314 | MDR-TB | lineage2.2.1 | None | SRR12080304 | MDR-TB | lineage2.2.1 | None | ERR1035316 | MDR-TB | lineage4.3.2 | br | ERR1035354 | MDR-TB | lineage4.1.1 | br | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR8237304 | HR-TB | lineage2.2.1 | np | ERR4816478 | HR-TB | lineage4 | None | SRR12080286 | MDR-TB | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR15465779 | MDR-TB | lineage2.2.1 | None | ERR13265869 | Sensitive | lineage2.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR12080272 | MDR-TB | lineage2.2.1 | None | ERR13265186 | Sensitive | lineage2.2.1 | None | SRR12080275 | MDR-TB | lineage2.2.1 | None | SRR26159066 | Sensitive | lineage4.9 | None | SRR12080290 | MDR-TB | lineage2.2.1 | None | ERR8773591 | MDR-TB | lineage2.2.1 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR12080335 | MDR-TB | lineage2.2.1 | None | SRR12080270 | MDR-TB | lineage2.2.1 | None | SRR12080338 | MDR-TB | lineage2.2.1 | None | SRR8237326 | HR-TB | lineage2.2.1 | np | ERR2516823 | MDR-TB | lineage2.2.1 | gb | SRR12080291 | MDR-TB | lineage2.2.1 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR1213889 | MDR-TB | lineage4.3.4.2.1 | rw | SRR28170745 | Sensitive | lineage2.2.1 | None | SRR28044431 | HR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR12080297 | MDR-TB | lineage2.2.1 | None | ERR1035301 | MDR-TB | lineage4.3.2 | br | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR7645928 | Other | lineage4.7 | None | ERR13265105 | Sensitive | lineage2.2.1 | None | ERR176651 | Other | lineage4.9 | None | SRR7755657 | Other | lineage4.8 | None | SRR12080327 | MDR-TB | lineage2.2.1 | None | SRR12080279 | MDR-TB | lineage2.2.1 | None | SRR12080288 | HR-TB | lineage2.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR12080333 | MDR-TB | lineage2.2.1 | None | SRR28044765 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
