EBG00000313339 - n.179A>G
Drug resistance types
44 Sensitive
13 RR-TB
85 HR-TB
102 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1 | 1 |
| lineage2.2.1 | 121 |
| lineage4 | 30 |
| 47 | |
| lineage4.3.4.2 | 7 |
| lineage4.3.4.1 | 5 |
| lineage4.3.4.2;lineage4.3.3 | 1 |
| lineage4.3.3 | 5 |
| lineage1 | 2 |
| lineage4.4.1.1 | 2 |
| lineage3.1.3 | 1 |
| lineage6 | 1 |
| lineage4.9 | 13 |
| lineage4.1.1 | 2 |
| lineage4.8 | 6 |
| lineage4.3.4.2.1 | 5 |
| lineage4.6 | 1 |
| lineage4.3.1.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.3.2 | 4 |
| lineage4.1.2.1 | 9 |
| lineage3 | 2 |
| lineage4.1 | 1 |
| lineage4.7 | 1 |
| lineage4.2.1 | 5 |
| lineage4.4.1.2 | 2 |
| lineage2.2 | 2 |
| lineage4.3 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.6.1.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 297 |
Geographic prevalence
Country level data for this variant is available for 35 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341422 | HR-TB | lineage2.1 | None | ERR233375 | Sensitive | lineage2.2.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212123 | Other | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR212138 | HR-TB | lineage4 | None | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR1034911 | MDR-TB | lineage4.3.4.2;lineage4.3.3 | pt | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816656 | HR-TB | None | ERR4818988 | Other | lineage1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR5341373 | HR-TB | lineage4 | None | ERR2513924 | RR-TB | lineage4.8 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4819051 | Other | lineage4 | None | SRR5007186 | Other | lineage4.6 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6046362 | HR-TB | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR1213874 | MDR-TB | lineage2.2.1 | kr | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | ERR1213875 | Sensitive | lineage4.3.3 | de | ERR1213899 | Other | lineage4.1.1.3 | pe | ERR1213889 | MDR-TB | lineage4.3.4.2.1 | rw | ERR1213928 | MDR-TB | lineage4.3.3 | pe | SRR6046460 | HR-TB | None | ERR1213930 | Other | lineage4.3.2 | pe | ERR1213900 | RR-TB | lineage4.1.2.1 | pe | ERR2516823 | MDR-TB | lineage2.2.1 | gb | ERR4797241 | Sensitive | lineage2.2.1 | in | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046815 | Other | lineage3 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | ERR4797002 | Sensitive | lineage2.2.1 | in | SRR9971378 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR8217918 | HR-TB | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755657 | Other | lineage4.8 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR323045 | HR-TB | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR027293 | Other | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1034634 | HR-TB | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1213867 | Other | lineage4.3.4.2 | None | ERR108471 | HR-TB | lineage4 | None | ERR11043912 | Sensitive | lineage2.2.1 | None | ERR1213871 | HR-TB | lineage4.3.2 | None | ERR1063859 | HR-TB | None | ERR1213919 | MDR-TB | lineage4.3 | None | ERR1213870 | MDR-TB | lineage4.3.4.2 | None | ERR133825 | Sensitive | lineage4 | None | ERR1213920 | HR-TB | lineage4.1.2 | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283047 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797067 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR473332 | Other | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR4800690 | Pre-XDR-TB | lineage2.2.1 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866410 | Sensitive | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736835 | HR-TB | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR2124081 | MDR-TB | lineage4.6.1.2 | None | SRR27241222 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137407 | Pre-XDR-TB | lineage2.2.1 | None | SRR22249635 | Sensitive | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR21732776 | Sensitive | lineage2.2.1 | None | SRR21732802 | Sensitive | lineage2.2.1 | None | SRR21732993 | HR-TB | lineage2.2.1 | None | SRR21733168 | HR-TB | lineage2.2.1 | None | SRR22249502 | Sensitive | lineage2.2.1 | None | ERR8773591 | MDR-TB | lineage2.2.1 | None | ERR8773589 | MDR-TB | lineage2.2.1 | None | ERR9119669 | HR-TB | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR9892002 | Sensitive | lineage2.2.1 | None | ERR970441 | RR-TB | lineage2.2.1.1 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9786774 | Sensitive | lineage4.3.4.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR12080274 | MDR-TB | lineage2.2.1 | None | SRR12080269 | HR-TB | lineage2.2.1 | None | SRR12080271 | MDR-TB | lineage2.2.1 | None | SRR12080275 | MDR-TB | lineage2.2.1 | None | SRR12080273 | MDR-TB | lineage2.2.1 | None | SRR12080277 | HR-TB | lineage2.2.1 | None | SRR12080272 | MDR-TB | lineage2.2.1 | None | SRR12080278 | MDR-TB | lineage2.2.1 | None | SRR12080281 | MDR-TB | lineage2.2.1 | None | SRR12080276 | MDR-TB | lineage2.2.1 | None | SRR12080279 | MDR-TB | lineage2.2.1 | None | SRR12080283 | MDR-TB | lineage2.2.1 | None | SRR12080280 | MDR-TB | lineage2.2.1 | None | SRR12080285 | MDR-TB | lineage2.2.1 | None | SRR12080284 | MDR-TB | lineage2.2.1 | None | SRR12080282 | MDR-TB | lineage2.2.1 | None | SRR12080287 | MDR-TB | lineage2.2.1 | None | SRR12080290 | MDR-TB | lineage2.2.1 | None | SRR12080286 | MDR-TB | lineage2.2.1 | None | SRR12080288 | HR-TB | lineage2.2.1 | None | SRR12080291 | MDR-TB | lineage2.2.1 | None | SRR12080289 | MDR-TB | lineage2.2.1 | None | SRR12080295 | MDR-TB | lineage2.2.1 | None | SRR12080292 | MDR-TB | lineage2.2.1 | None | SRR12080296 | MDR-TB | lineage2.2.1 | None | SRR12080293 | MDR-TB | lineage2.2.1 | None | SRR12080297 | MDR-TB | lineage2.2.1 | None | SRR12080294 | MDR-TB | lineage2.2.1 | None | SRR12080301 | MDR-TB | lineage2.2.1 | None | SRR12080299 | HR-TB | lineage2.2.1 | None | SRR12080298 | MDR-TB | lineage2.2.1 | None | SRR12080304 | MDR-TB | lineage2.2.1 | None | SRR12080302 | MDR-TB | lineage2.2.1 | None | SRR12080300 | MDR-TB | lineage2.2.1 | None | SRR12080308 | MDR-TB | lineage2.2.1 | None | SRR12080303 | MDR-TB | lineage2.2.1 | None | SRR12080305 | MDR-TB | lineage2.2.1 | None | SRR12080309 | MDR-TB | lineage2.2.1 | None | SRR12080306 | MDR-TB | lineage2.2.1 | None | SRR12080307 | MDR-TB | lineage2.2.1 | None | SRR12080312 | MDR-TB | lineage2.2.1 | None | SRR12080311 | MDR-TB | lineage2.2.1 | None | SRR12080310 | HR-TB | lineage2.2.1 | None | SRR12080313 | MDR-TB | lineage2.2.1 | None | SRR12080315 | MDR-TB | lineage2.2.1 | None | SRR12080316 | MDR-TB | lineage2.2.1 | None | SRR12080320 | MDR-TB | lineage2.2.1 | None | SRR12080317 | MDR-TB | lineage2.2.1 | None | SRR12080318 | MDR-TB | lineage2.2.1 | None | SRR12080323 | MDR-TB | lineage2.2.1 | None | SRR12080319 | MDR-TB | lineage2.2.1 | None | SRR12080314 | MDR-TB | lineage2.2.1 | None | SRR12080322 | MDR-TB | lineage2.2.1 | None | SRR12080328 | MDR-TB | lineage2.2.1 | None | SRR12080325 | MDR-TB | lineage2.2.1 | None | SRR12080326 | MDR-TB | lineage2.2.1 | None | SRR12080327 | MDR-TB | lineage2.2.1 | None | SRR12080324 | MDR-TB | lineage2.2.1 | None | SRR12080332 | HR-TB | lineage2.2.1 | None | SRR12080331 | MDR-TB | lineage2.2.1 | None | SRR12080329 | MDR-TB | lineage2.2.1 | None | SRR12080330 | MDR-TB | lineage2.2.1 | None | SRR12080333 | MDR-TB | lineage2.2.1 | None | SRR12080335 | MDR-TB | lineage2.2.1 | None | SRR12080334 | MDR-TB | lineage2.2.1 | None | SRR12080336 | MDR-TB | lineage2.2.1 | None | SRR12080339 | MDR-TB | lineage2.2.1 | None | SRR12080338 | MDR-TB | lineage2.2.1 | None | SRR12080337 | MDR-TB | lineage2.2.1 | None | SRR12080343 | HR-TB | lineage2.2.1 | None | SRR12080344 | HR-TB | lineage2.2.1 | None | SRR12080340 | MDR-TB | lineage2.2.1 | None | SRR12080341 | MDR-TB | lineage2.2.1 | None | SRR15364436 | HR-TB | lineage2.2.1 | None | SRR12080342 | MDR-TB | lineage2.2.1 | None | SRR12080270 | MDR-TB | lineage2.2.1 | None | SRR12080268 | MDR-TB | lineage2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR26112695 | Sensitive | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR15465779 | MDR-TB | lineage2.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR28170745 | Sensitive | lineage2.2.1 | None | SRR21714039 | Sensitive | lineage2.2.1 | None | SRR22249538 | Sensitive | lineage2.2.1 | None | ERR11068796 | Sensitive | lineage2.2.1 | None | SRR25827763 | Other | lineage2.2.1 | None | SRR27450251 | Sensitive | lineage2.2.1 | None | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | ERR176778 | HR-TB | None | ERR1035293 | MDR-TB | lineage4.3.4.2 | br | ERR1035296 | HR-TB | lineage4.9 | br | ERR176779 | HR-TB | None | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR1035301 | MDR-TB | lineage4.3.2 | br | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | ERR1035315 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | ERR1035316 | MDR-TB | lineage4.3.2 | br | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR1035317 | RR-TB | lineage4.3.4.2 | br | ERR1035318 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR1035353 | MDR-TB | lineage4.4.1.2 | br | SRR3105738 | HR-TB | lineage2.2.1 | None | ERR1035354 | MDR-TB | lineage4.1.1 | br | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR4814507 | Other | lineage2.2.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4814748 | Other | lineage4.8 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR8237332 | HR-TB | lineage2.2.1 | np | ERR181824 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR8237323 | MDR-TB | lineage2.2.1 | np | SRR8237326 | HR-TB | lineage2.2.1 | np | SRR8237304 | HR-TB | lineage2.2.1 | np | SRR8237377 | Sensitive | lineage2.2.1 | ch | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675510 | Other | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR3675456 | HR-TB | None |
|---|
