EBG00000313339 - n.179A>G


Drug resistance types
36 Sensitive 6 RR-TB 61 HR-TB 109 MDR-TB 15 Pre-XDR-TB 1 XDR-TB 44 Other
lineage Counts
lineage Count
lineage4.9 63
lineage2.2.1 121
La3;lineage4.9 9
La1.7;lineage4.9;lineage7 1
lineage4.8 2
lineage4.2.1 5
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.3 5
lineage4.4.1.2 2
La3;lineage4 1
lineage4.1.2.1 8
lineage4.3.2 3
lineage4.9;lineage7 2
lineage4.3.4.1 5
lineage4.3.4.2 4
lineage4.3.4.2.1 4
La2;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage4.4.1.1 1
lineage2.1;lineage4.9 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
lineage1;lineage4.9 1
La1.7;lineage4.9 3
lineage4.6.1.2 2
La1.7.1;lineage4.9 1
La1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La2;lineage2.2 1
lineage4.1.1.3 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
lineage4.7 1
lineage4 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.3.3;lineage4.3.4.2 1
La1.2.BCG 1
M.canetti;lineage4.9;lineage9 1
lineage1.1.3.1 1
La1.7;M.canetti;lineage4.9 1
lineage2.2 1
lineage4.1.1 1
lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 272
Geographic prevalence
Country level data for this variant is available for 35 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6866410 HR-TB lineage4.9 None
SRR25827763 Other lineage2.2.1 None
SRR21714039 Sensitive lineage2.2.1 None
ERR3283031 Other La3;lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7645927 Other lineage4.8 None
SRR12080336 MDR-TB lineage2.2.1 None
SRR27241222 Pre-XDR-TB lineage2.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR12080342 MDR-TB lineage2.2.1 None
SRR12080313 MDR-TB lineage2.2.1 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR15014655 Other M.canetti;lineage1 None
ERR1063849 HR-TB lineage4.9 None
SRR12080340 MDR-TB lineage2.2.1 None
ERR9892002 Sensitive lineage2.2.1 None
SRR7645899 Other lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
SRR12080308 MDR-TB lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR12080306 MDR-TB lineage2.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR12080283 MDR-TB lineage2.2.1 None
ERR4821704 Other lineage4.3.3 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR233375 Sensitive lineage2.2.1 None
SRR12080332 HR-TB lineage2.2.1 None
ERR1035353 MDR-TB lineage4.4.1.2 br
ERR3283014 Other La3;lineage4.9 None
SRR15465779 MDR-TB lineage2.2.1 None
ERR8773591 MDR-TB lineage2.2.1 None
SRR19295647 HR-TB lineage4.9 None
SRR12080288 HR-TB lineage2.2.1 None
SRR12080275 MDR-TB lineage2.2.1 None
SRR12080341 MDR-TB lineage2.2.1 None
SRR12080328 MDR-TB lineage2.2.1 None
SRR27450251 Sensitive lineage2.2.1 None
SRR10808730 Other lineage4.9 None
SRR12080270 MDR-TB lineage2.2.1 None
SRR12080289 MDR-TB lineage2.2.1 None
SRR8237323 MDR-TB lineage2.2.1 np
SRR12080315 MDR-TB lineage2.2.1 None
ERR970413 MDR-TB lineage2.2.1 None
SRR22249635 Sensitive lineage2.2.1 None
SRR12080302 MDR-TB lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR12080334 MDR-TB lineage2.2.1 None
ERR2516823 MDR-TB lineage2.2.1 gb
SRR12080281 MDR-TB lineage2.2.1 None
SRR12080296 MDR-TB lineage2.2.1 None
ERR736856 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR1035300 HR-TB lineage4.1.2.1 br
ERR971389 Other lineage4.9 None
SRR28045249 Pre-XDR-TB lineage2.2.1 None
SRR28044431 HR-TB lineage2.2.1 None
SRR28045025 MDR-TB lineage2.2.1 None
SRR12080343 HR-TB lineage2.2.1 None
ERR4819051 Sensitive lineage4.9 None
SRR12080327 MDR-TB lineage2.2.1 None
SRR12080303 MDR-TB lineage2.2.1 None
ERR1035316 MDR-TB lineage4.3.2 br
SRR11342649 MDR-TB lineage4.3.3 None
ERR4797002 Sensitive lineage2.2.1 in
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR12080297 MDR-TB lineage2.2.1 None
ERR1034907 Pre-XDR-TB lineage4.3.4.1 pt
SRR12080305 MDR-TB lineage2.2.1 None
ERR1035317 RR-TB lineage4.3.4.2 br
ERR1035296 HR-TB lineage4.9 br
SRR2024953 MDR-TB lineage2.2.1 cn
SRR21732802 Sensitive lineage2.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR12080316 MDR-TB lineage2.2.1 None
ERR4820773 HR-TB lineage4.9 None
ERR11068796 Sensitive lineage2.2.1 None
ERR3797015 HR-TB lineage4.9 None
ERR926156 Other lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR12080278 MDR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
SRR12080320 MDR-TB lineage2.2.1 None
ERR1035295 MDR-TB lineage4.1.2.1 br
ERR736848 Other lineage4.9 None
SRR12080268 MDR-TB lineage2.2.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR22249502 Sensitive lineage2.2.1 None
ERR1213900 RR-TB lineage4.1.2.1 pe
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR12080282 MDR-TB lineage2.2.1 None
ERR4769521 RR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR12080331 MDR-TB lineage2.2.1 None
SRR8237332 HR-TB lineage2.2.1 np
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR12080317 MDR-TB lineage2.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR21733168 HR-TB lineage2.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR926160 Other lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR3675582 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR12080344 HR-TB lineage2.2.1 None
ERR1063846 HR-TB lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7645906 Other lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR12080294 MDR-TB lineage2.2.1 None
ERR1213930 Other lineage4.3.2 pe
SRR3105738 HR-TB lineage2.2.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR2124081 MDR-TB lineage4.6.1.2 None
SRR12080314 MDR-TB lineage2.2.1 None
ERR4769474 HR-TB lineage4.9 None
SRR12080318 MDR-TB lineage2.2.1 None
ERR1035301 MDR-TB lineage4.3.2 br
ERR1063858 HR-TB lineage4.9 None
ERR8773589 MDR-TB lineage2.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR12080286 MDR-TB lineage2.2.1 None
SRR28170745 Sensitive lineage2.2.1 None
ERR1035294 MDR-TB lineage4.1.2.1 br
SRR6044875 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR12080276 MDR-TB lineage2.2.1 None
ERR926164 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR12080280 MDR-TB lineage2.2.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR473332 Other lineage4.9 None
SRR12080274 MDR-TB lineage2.2.1 None
SRR12080330 MDR-TB lineage2.2.1 None
ERR11043912 Sensitive lineage2.2.1 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR3283040 HR-TB lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR12080284 MDR-TB lineage2.2.1 None
ERR212125 HR-TB lineage4.9 None
SRR12080329 MDR-TB lineage2.2.1 None
SRR12080301 MDR-TB lineage2.2.1 None
ERR1035315 Pre-XDR-TB lineage4.3.4.1 br
SRR12080323 MDR-TB lineage2.2.1 None
ERR4819241 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR970445 MDR-TB lineage2.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR1035299 MDR-TB lineage4.1.2.1 br
SRR28044666 XDR-TB lineage2.2.1 None
SRR28045250 Pre-XDR-TB lineage2.2.1 None
ERR779852 HR-TB lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
SRR12080339 MDR-TB lineage2.2.1 None
ERR3797079 Sensitive lineage4.9 None
ERR4797241 Sensitive lineage2.2.1 in
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR1213899 Other lineage4.1.1.3 pe
ERR2124083 HR-TB lineage4.6.1.2 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR12080298 MDR-TB lineage2.2.1 None
ERR3797048 Other La3;lineage4.9 None
ERR1213889 MDR-TB lineage4.3.4.2.1 rw
SRR22249538 Sensitive lineage2.2.1 None
SRR21732993 HR-TB lineage2.2.1 None
ERR387051 RR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR12080293 MDR-TB lineage2.2.1 None
SRR12080300 MDR-TB lineage2.2.1 None
SRR12080271 MDR-TB lineage2.2.1 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR1035297 MDR-TB lineage4.3.4.1 br
ERR181887 Other lineage4.9 None
SRR12080312 MDR-TB lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
SRR8237326 HR-TB lineage2.2.1 np
ERR926158 Sensitive lineage4.9 None
SRR7645928 Other lineage4.7 None
SRR12080338 MDR-TB lineage2.2.1 None
ERR1035293 MDR-TB lineage4.3.4.2 br
SRR6789624 HR-TB lineage4.1.1.3 None
ERR926163 Other lineage4.9 None
ERR1213875 Sensitive lineage4.3.3 de
SRR8237377 Sensitive lineage2.2.1 ch
ERR751326 Other lineage4.9 None
ERR1213928 MDR-TB lineage4.3.3 pe
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR12080304 MDR-TB lineage2.2.1 None
ERR4817731 HR-TB lineage4.9 None
SRR8237304 HR-TB lineage2.2.1 np
ERR4816478 HR-TB lineage4 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR3797064 Other La3;lineage4.9 None
ERR1035312 Pre-XDR-TB lineage4.3.3 br
SRR12080273 MDR-TB lineage2.2.1 None
ERR3797047 MDR-TB lineage4.9 None
ERR4800690 Pre-XDR-TB lineage2.2.1 None
SRR12080310 HR-TB lineage2.2.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR12080326 MDR-TB lineage2.2.1 None
ERR3797086 Sensitive lineage4.9 None
SRR22137407 Pre-XDR-TB lineage2.2.1 None
SRR12080279 MDR-TB lineage2.2.1 None
SRR12080290 MDR-TB lineage2.2.1 None
ERR1034911 MDR-TB lineage4.3.3;lineage4.3.4.2 pt
SRR12080299 HR-TB lineage2.2.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR12080277 HR-TB lineage2.2.1 None
SRR12080335 MDR-TB lineage2.2.1 None
ERR4819422 HR-TB lineage4.9 None
ERR926155 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR12080291 MDR-TB lineage2.2.1 None
SRR12080319 MDR-TB lineage2.2.1 None
ERR161037 HR-TB lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
SRR12080337 MDR-TB lineage2.2.1 None
SRR12080307 MDR-TB lineage2.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR181824 MDR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR28046041 MDR-TB lineage2.2.1 None
SRR28044765 Pre-XDR-TB lineage2.2.1 None
SRR28045579 Pre-XDR-TB lineage2.2.1 None
SRR12080269 HR-TB lineage2.2.1 None
ERR3797029 Other lineage4.9 None
SRR15364436 HR-TB lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR1035318 Pre-XDR-TB lineage4.3.4.1 br
SRR12080333 MDR-TB lineage2.2.1 None
ERR3797087 Sensitive lineage4.9 None
SRR21732776 Sensitive lineage2.2.1 None
ERR176651 Other lineage4.9 None
SRR12080292 MDR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
SRR7755657 Other lineage4.8 None
ERR1035354 MDR-TB lineage4.1.1 br
ERR736817 HR-TB lineage4.3.4 None
SRR7645971 Other lineage2.2.1 None
ERR1213874 MDR-TB lineage2.2.1 kr
SRR12080324 MDR-TB lineage2.2.1 None
SRR12080322 MDR-TB lineage2.2.1 None
SRR12080325 MDR-TB lineage2.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR4188247 HR-TB lineage4.9 None
ERR926165 Other lineage4.9 None