Rv1630 - c.-5_-1delACAATinsCCAC
Drug resistance types
15 Sensitive
1 RR-TB
21 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 32 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.7;lineage4.9 | 2 |
| La2;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.2.BCG;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR181824 | HR-TB | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
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