Rv0006 - c.-680C>T


Drug resistance types
21 Sensitive 1 RR-TB 136 HR-TB 12 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 83 Other
lineage Counts
lineage Count
138
La1.8.1 2
lineage4 31
lineage4.9 18
lineage4.1.2.1 8
lineage4.1.3 2
La1.2 1
lineage2 3
lineage3 3
La1 2
lineage2.2.1 11
lineage2.2 7
lineage2.2.1.2 1
lineage1.2.1.2 1
lineage4.6.1.1 3
lineage4.3.4 2
lineage1.1.3.1 1
lineage1.1.2 1
lineage4.3.2 1
lineage4.1.1 2
lineage4.8 3
lineage4.6.2.2 1
lineage6.3.1 1
lineage2.2.1.1 1
lineage3.1 2
lineage1.1.1 1
lineage4.5 1
lineage4.9;La3 1
lineage6.3;lineage2.2.1 1
lineage2.1 1
lineage4.8;La3 1
lineage4.1 1
lineage4;lineage1.1 1
lineage4.7 1
lineage4.3.4.1 1
lineage4.2.1 1
spoligotype Counts
spoligotype Count
None 257
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3797069 Other None
ERR3797063 HR-TB None
ERR3797073 HR-TB La1.8.1 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797086 Other lineage4.9 None
ERR3797087 Sensitive lineage4 None
ERR3804155 Other lineage4.1.2.1 None
ERR403298 HR-TB lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR387051 HR-TB None
ERR473332 Other lineage4 None
ERR4407463 HR-TB None
ERR4769452 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769497 HR-TB La1.2 None
ERR4769474 HR-TB lineage4 None
ERR4769521 HR-TB None
ERR4810741 HR-TB None
ERR4796929 Sensitive lineage4 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797588 MDR-TB lineage3 None
ERR4798262 HR-TB La1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4800341 Other lineage3 None
ERR4810624 HR-TB lineage2.2 None
ERR4798406 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR6866807 HR-TB lineage4 None
ERR4811142 MDR-TB None
ERR4811493 HR-TB None
ERR6358979 Other None
ERR6358991 HR-TB None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR6336804 HR-TB lineage1.2.1.2 None
ERR6358755 Other lineage4.6.1.1 None
ERR6866410 Sensitive None
ERR736817 HR-TB lineage4.3.4 None
ERR702406 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736839 Other None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR736867 HR-TB None
ERR736875 HR-TB lineage4 None
ERR736874 HR-TB None
ERR9117709 HR-TB None
ERR9119669 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117805 Other lineage4.3.2 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786604 Other None
ERR9786617 Other lineage4.1.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786645 Other lineage4.6.2.2 None
ERR9787197 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR1172234 Other None
SRR10809074 Sensitive lineage4 None
SRR1173118 Other None
SRR1172817 HR-TB None
SRR1172951 Other None
SRR1172728 MDR-TB None
SRR1173363 HR-TB None
SRR1173400 Other None
SRR1173384 Other lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173562 HR-TB lineage4 None
SRR1183144 Other lineage2.2.1 None
SRR1173629 Other None
SRR1173778 Other None
SRR1180172 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1173788 Other None
SRR1175074 MDR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1196546 HR-TB None
SRR1184381 MDR-TB None
SRR1196494 MDR-TB None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1196474 HR-TB lineage3.1 None
SRR1196566 HR-TB None
SRR14066533 Sensitive lineage1.1.1 None
SRR1196768 MDR-TB None
SRR12142341 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR12416824 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR14801749 Sensitive None
SRR19295647 Sensitive lineage4.9 None
SRR19304036 HR-TB None
SRR14782405 HR-TB None
SRR15368973 Other None
SRR18213713 HR-TB lineage4.5 None
SRR18910194 HR-TB lineage2.2 None
SRR19303884 HR-TB None
SRR26399973 Other lineage4.9;La3 None
SRR20969708 HR-TB lineage2.2 None
ERR176778 HR-TB None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR4815604 HR-TB None
SRR3675502 Other None
ERR181824 HR-TB lineage4 None
ERR176779 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR158583 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR161039 Sensitive lineage4.3.4 None
ERR181744 HR-TB None
SRR3675221 HR-TB None
SRR3675465 HR-TB None
SRR3675236 HR-TB None
SRR3675280 HR-TB lineage4.9 None
ERR176651 HR-TB None
SRR3675284 HR-TB lineage4.9 None
ERR181887 HR-TB None
SRR3675311 Other None
SRR3675510 Other None
ERR2229542 Other lineage4.8 None
SRR3675312 HR-TB lineage4 None
SRR3675456 HR-TB None
ERR2027263 Other lineage4 None
ERR4816999 Other None
SRR5341422 HR-TB lineage2.1 None
SRR3675550 Other None
SRR3675572 Other None
SRR3675555 HR-TB None
ERR212034 HR-TB None
ERR4817060 RR-TB None
ERR212123 Other None
ERR212121 HR-TB None
ERR212125 HR-TB lineage4 None
SRR3675571 HR-TB None
ERR212138 HR-TB lineage4 None
ERR4817735 Other lineage4.8 None
ERR4816656 HR-TB None
SRR3742665 HR-TB None
ERR4816585 Other lineage2.2 None
ERR4817893 Other lineage4.8;La3 None
ERR4818929 HR-TB None
ERR4817896 HR-TB lineage2.2.1 None
SRR7496472 Other None
ERR4818021 Other La1.8.1 None
ERR2446566 Other lineage4.1 None
ERR234659 HR-TB None
SRR5341400 HR-TB lineage4 None
ERR4818615 Other None
SRR5341373 HR-TB lineage4 None
SRR5341456 Other None
ERR4819322 Other lineage4;lineage1.1 None
SRR5341418 Other None
ERR1035138 MDR-TB None
SRR5341313 HR-TB None
ERR4819781 Other lineage2.2.1 None
SRR5341302 HR-TB None
ERR4819932 Other lineage4.7 None
SRR5341330 HR-TB None
SRR5341333 HR-TB None
ERR6359082 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR2693238 HR-TB lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR2660459 Sensitive lineage4.3.4.1 None
SRR6045217 Other lineage4 None
SRR6045555 HR-TB None
SRR6046133 HR-TB None
SRR6044835 Sensitive lineage4 None
ERR2693227 Other lineage4.9 None
SRR6045892 Sensitive None
SRR6044790 HR-TB None
SRR6044855 Other lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045233 HR-TB None
SRR6046210 Other lineage4 None
SRR6046259 Sensitive lineage4.9 None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
SRR6046225 HR-TB None
SRR6046299 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046362 HR-TB None
SRR6046460 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
ERR294266 HR-TB None
SRR6046540 HR-TB None
SRR6046594 HR-TB lineage4 None
ERR4831117 HR-TB None
ERR4831546 HR-TB lineage2.2 None
SRR6785262 Sensitive lineage4.2.1 None
SRR6789626 Other None
SRR6046482 HR-TB None
SRR6046492 Other None
SRR6046824 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6785413 Other lineage2.2.1 None
ERR502532 HR-TB None
ERR502889 Other None
ERR1034652 Other None
SRR7585435 Other lineage4.9 None
ERR323043 HR-TB None
ERR067681 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR8217918 HR-TB None
SRR7496509 Other None
ERR323045 HR-TB None
ERR1063857 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1063839 HR-TB lineage2.2 None
ERR1063859 HR-TB None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR1063883 Sensitive lineage4 None
ERR108471 HR-TB lineage4 None
ERR133986 HR-TB None
ERR323115 Sensitive lineage4 None
ERR3283031 HR-TB None
ERR3283010 Other La1 None
ERR3283014 HR-TB None
ERR3283025 HR-TB None
ERR3283028 Other None
ERR3283027 HR-TB None
ERR3283047 HR-TB None
ERR3283036 HR-TB None
ERR3283055 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3439432 Other None
ERR3445504 HR-TB None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR5336148 Other None
ERR3797046 HR-TB None
ERR3797043 HR-TB None
ERR3470647 Other lineage3 None
ERR3797048 HR-TB None
ERR3797036 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797071 Other lineage4.9 None