Rv0668 - c.2593_2595delTTGinsCT
Drug resistance types
56 Sensitive
5 RR-TB
36 HR-TB
11 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 118 |
| La1.7;lineage4.9 | 4 |
| lineage4.1.2.1 | 3 |
| La1.7.1;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| La1.2.BCG | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 3 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.5 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La2;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.2.BCG;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4 | 4 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage5.1.4 | 1 |
| 1 | |
| lineage2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1;lineage4.9 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 170 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176779 | HR-TB | lineage4.9 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | SRR6045503 | Other | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR363421 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR926165 | Other | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR369163 | Other | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4811031 | Other | lineage4.5 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR363479 | Other | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR363500 | Other | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR363446 | Other | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR12708416 | Sensitive | None | ERR349300 | Other | lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR373945 | Other | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None |
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