Rv0006 - c.1572A>C


Drug resistance types
29 Sensitive 5 RR-TB 191 HR-TB 21 MDR-TB 11 Pre-XDR-TB 0 XDR-TB 138 Other
lineage Counts
lineage Count
169
lineage4 35
lineage2.1 3
lineage4.1.1.3 1
lineage4.4.1.1 2
lineage2.2 10
lineage4;lineage1.1.2 1
lineage4;lineage2 1
lineage2.2.1 20
lineage4.8 3
lineage4.9 53
lineage4.8;La3 2
La1.8.1 2
lineage4.1.1 3
lineage3 8
lineage1.1.1 1
lineage4;lineage1.1 1
lineage4.1.2.1 18
lineage4.7 2
lineage1.1 1
lineage3.1 4
lineage5.2 2
lineage4.6.2.2 5
lineage4.2.1 1
lineage4.3.4.2.1 2
La1 1
lineage4.4.1.1;lineage1.2.2.1 1
lineage4.1.3 2
lineage2 4
lineage4.6.1.1 1
lineage4.3.4 1
lineage4.3.2 2
lineage4.1.2.1.1 1
lineage4.8;lineage4.1 2
lineage1.1.2 1
lineage6.3.1 1
lineage6 1
lineage6.1.3 1
lineage2.2.2 1
lineage4.4.1.1.1 2
La3 1
lineage4.3.3 3
lineage2.2.1.1 4
lineage1.2.1.2 1
lineage4.5 2
lineage4.3.4.1 1
lineage1.2.1.2.1 1
lineage7;lineage2.2.1.2 1
lineage3.1.3 1
lineage4.9;La1 1
lineage4.9;La3 1
La1.2 1
lineage6.3;lineage4.9;lineage2.1 1
lineage6.3;lineage2.2.1 1
lineage4.1 1
lineage3;lineage2.1 1
lineage4.3 1
spoligotype Counts
spoligotype Count
None 395
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4816999 Other None
SRR3675545 HR-TB None
ERR2027263 Other lineage4 None
ERR212034 HR-TB None
ERR212001 HR-TB None
SRR3675550 Other None
SRR5341422 HR-TB lineage2.1 None
ERR212033 HR-TB None
ERR212125 HR-TB lineage4 None
SRR3675572 Other None
SRR3675558 HR-TB None
SRR3742665 HR-TB None
SRR3675574 HR-TB None
ERR212138 HR-TB lineage4 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR212121 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4816585 Other lineage2.2 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4816656 HR-TB None
ERR4816762 Other lineage4;lineage2 None
ERR502912 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR4817735 Other lineage4.8 None
SRR7496472 Other None
ERR4817896 HR-TB lineage2.2.1 None
ERR4818710 Sensitive lineage4.9 None
ERR4817893 Other lineage4.8;La3 None
ERR4818110 Sensitive lineage4.9 None
ERR4818021 Other La1.8.1 None
ERR2229143 Other lineage4.1.1 None
ERR1035162 Other None
ERR234659 HR-TB None
ERR4818561 HR-TB lineage4 None
ERR4819051 Other lineage4 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818394 Other lineage4.9 None
ERR4818929 HR-TB None
ERR3275709 HR-TB lineage3 nl
ERR4818607 Sensitive lineage4.9 None
ERR4818615 Other None
ERR4819314 Other lineage1.1.1 None
SRR5341373 HR-TB lineage4 None
ERR4819280 Sensitive lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819322 Other lineage4;lineage1.1 None
ERR4819357 Other lineage4.9 None
SRR5341432 HR-TB lineage4 None
ERR4820335 Other lineage4.1.2.1 None
SRR5341418 Other None
ERR4819546 HR-TB lineage3 None
ERR2514692 Other None
ERR4819740 Sensitive lineage4.9 None
SRR5341293 HR-TB lineage4 None
ERR1035138 MDR-TB None
ERR4819781 Other lineage2.2.1 None
ERR2514821 Other lineage2.2.1 None
SRR5341302 HR-TB None
SRR5341313 HR-TB None
ERR1023509 Other None
ERR4819933 Other lineage4.9 None
SRR5341315 Sensitive None
ERR4819932 Other lineage4.7 None
ERR4820854 Other lineage4.1.2.1 None
SRR5341333 HR-TB None
SRR5341330 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
ERR2660539 Other lineage4.9 None
SRR6045503 HR-TB None
SRR6045526 HR-TB None
SRR6045519 HR-TB None
SRR6046141 Other lineage4.9 None
ERR4827892 MDR-TB lineage2.2.1 None
ERR278594 HR-TB None
SRR6045555 HR-TB None
SRR6046133 HR-TB None
SRR6044790 HR-TB None
SRR6045832 HR-TB lineage4.9 None
SRR6044780 Other lineage4.9 None
SRR6044838 Other lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6045233 HR-TB None
SRR6044876 Sensitive lineage4 None
SRR6045952 HR-TB None
SRR6045010 Other lineage4 None
SRR6046046 Other None
SRR6044875 HR-TB lineage4.9 None
SRR6045053 Other None
SRR6045217 Other lineage4 None
SRR6046210 Other lineage4 None
SRR6045327 HR-TB None
SRR6046066 HR-TB None
SRR6045399 Other None
SRR6046259 Sensitive lineage4.9 None
SRR6046225 HR-TB None
SRR6046253 HR-TB lineage4.9 None
SRR6046305 Other lineage4.9 None
SRR6046482 HR-TB None
SRR6325444 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6046397 Other None
SRR6046514 HR-TB None
SRR6325448 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
SRR6325447 HR-TB None
SRR6046540 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6046824 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
ERR3077978 Other lineage1.1 None
SRR6325442 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR323037 HR-TB lineage4 None
ERR4831546 HR-TB lineage2.2 None
ERR485006 HR-TB lineage4.9 None
ERR4831117 HR-TB None
ERR4872094 MDR-TB lineage5.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
SRR6785262 Sensitive lineage4.2.1 None
ERR294248 HR-TB None
SRR6785238 Sensitive lineage2.2.1 None
ERR502532 HR-TB None
SRR6789626 Other None
ERR323036 HR-TB None
ERR502889 Other None
ERR5311099 HR-TB None
SRR7496509 Other None
ERR5311081 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
ERR323038 HR-TB None
ERR5311090 HR-TB None
SRR7496517 Other None
SRR7585435 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR7535086 Other None
ERR323055 HR-TB None
ERR323043 HR-TB None
ERR323045 HR-TB None
ERR323041 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR323108 HR-TB lineage4 None
ERR067681 HR-TB None
ERR1034634 HR-TB None
ERR067712 HR-TB lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1034652 Other None
ERR3283036 HR-TB None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR1063857 HR-TB None
ERR133986 HR-TB None
ERR3283010 Other La1 None
ERR3283017 HR-TB None
ERR3283027 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1063839 HR-TB lineage2.2 None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR108471 HR-TB lineage4 None
ERR11465714 Other lineage4.4.1.1;lineage1.2.2.1 None
ERR3283025 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR5336148 Other None
ERR3283058 Other lineage4.9 None
ERR3283048 HR-TB lineage4.9 None
ERR3445501 HR-TB None
ERR3439432 Other None
ERR3445502 HR-TB lineage4 None
ERR3797016 HR-TB None
ERR3468544 HR-TB None
ERR3445503 HR-TB None
ERR3797015 HR-TB None
ERR3797069 Other None
ERR3797023 HR-TB La1.8.1 None
ERR3797036 HR-TB None
ERR3797043 HR-TB None
ERR3797083 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797082 Other lineage4.9 None
ERR3797081 Sensitive lineage4 None
ERR3804155 Other lineage4.1.2.1 None
ERR3797086 Other lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR403298 HR-TB lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4188247 HR-TB None
ERR4188350 HR-TB None
ERR4769450 HR-TB None
ERR4407463 HR-TB None
ERR473303 Sensitive lineage4.9 None
ERR473332 Other lineage4 None
ERR4769452 HR-TB None
ERR4407452 Sensitive lineage3 None
ERR473334 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4 None
ERR4769521 HR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797588 MDR-TB lineage3 None
ERR4798406 HR-TB None
ERR4798823 HR-TB lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR12015083 Other lineage4.8;La3 None
ERR4800341 Other lineage3 None
ERR4811022 HR-TB None
ERR4810624 HR-TB lineage2.2 None
ERR4810741 HR-TB None
ERR5917710 Other lineage4.1.2.1 None
ERR4811142 MDR-TB None
ERR4811105 HR-TB None
ERR4811493 HR-TB None
ERR6358837 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR6359069 Other lineage4.9 None
ERR6359045 HR-TB None
ERR702404 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR736817 HR-TB lineage4.3.4 None
ERR736831 HR-TB lineage4.9 None
ERR736867 HR-TB None
ERR702406 HR-TB None
ERR736835 HR-TB None
ERR736839 Other None
ERR736848 HR-TB None
ERR772255 MDR-TB lineage4.3.2 None
ERR736875 HR-TB lineage4 None
ERR736874 HR-TB None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9117709 HR-TB None
ERR8976043 HR-TB None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117805 Other lineage4.3.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9119669 HR-TB None
ERR9786515 Other lineage4.1.2.1 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786617 Other lineage4.1.1 None
ERR9786569 Other lineage4.8 None
ERR9786604 Other None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786843 Other None
ERR9787139 Other lineage6.3.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9787165 Other lineage6 None
ERR9787153 Other lineage6.1.3 None
ERR9787197 Other None
SRR069978 Pre-XDR-TB lineage2.2.2 None
SRR10809074 Sensitive lineage4 None
SRR069989 HR-TB lineage2 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1169194 Other None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1167384 Other lineage4 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1169249 Other La3 None
SRR1169306 Other None
SRR1173118 Other None
SRR1172728 MDR-TB None
SRR1172817 HR-TB None
SRR1172885 HR-TB lineage4.9 None
SRR1172951 Other None
SRR1172234 Other None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173153 HR-TB None
SRR1173629 Other None
SRR1173384 Other lineage4 None
SRR1173400 Other None
SRR1173363 HR-TB None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1173778 Other None
SRR1173788 Other None
SRR1175513 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175074 MDR-TB None
SRR1175506 Sensitive lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR1181020 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1181289 Other lineage2.2.1 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1184346 HR-TB lineage3.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183145 Other lineage2.2.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR1184294 HR-TB None
SRR1183106 Other lineage2.2.1.1 None
SRR1184388 Other None
SRR1184372 MDR-TB None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1196494 MDR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196768 MDR-TB None
SRR1196546 HR-TB None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR12416840 MDR-TB lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
SRR12142341 HR-TB None
SRR12142339 HR-TB lineage2.2.1 None
SRR13423544 Other lineage4.5 None
SRR12416824 HR-TB None
SRR13861288 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13423649 Sensitive lineage2.2.1 None
SRR13861439 RR-TB lineage4.9 None
SRR13861434 RR-TB lineage4.9 None
SRR13861372 Other lineage4.9 None
SRR13861447 RR-TB lineage4.9 None
SRR13861549 RR-TB lineage4.9 None
SRR1710057 Other lineage2.1 None
SRR1640750 HR-TB None
SRR13861556 Other lineage4.9 None
SRR13861571 RR-TB lineage4.9 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR15368973 Other None
SRR17658565 Other lineage3 None
SRR18003019 Other lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18910194 HR-TB lineage2.2 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR22424787 Sensitive lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR23961542 Other lineage4.9;La1 None
SRR21732980 Other lineage4.3.3 None
SRR26399490 Sensitive lineage4.9 None
SRR26399973 Other lineage4.9;La3 None
SRR23961549 Other La1.2 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
ERR176793 Other lineage4.1.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR176778 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR4815604 HR-TB None
ERR176779 HR-TB None
SRR3675482 HR-TB None
ERR1035239 HR-TB None
SRR6325445 HR-TB None
SRR3675465 HR-TB None
ERR158583 HR-TB None
SRR3416776 Other lineage2.1 None
ERR4814352 HR-TB lineage2.2.1 None
ERR161034 Other lineage4.3.4.2.1 None
ERR161033 HR-TB None
SRR3675486 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR4815471 Other lineage4.9 None
ERR4814639 HR-TB lineage4 None
SRR3675221 HR-TB None
ERR181824 HR-TB lineage4 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675236 HR-TB None
SRR3675270 HR-TB None
SRR3675311 Other None
ERR181887 HR-TB None
ERR176643 HR-TB None
ERR176568 Other lineage4.3 None
ERR176751 HR-TB None
ERR176651 HR-TB None
SRR3675312 HR-TB lineage4 None
ERR4816964 Other lineage4.9 None
SRR3675510 Other None