Rv0701 - c.-278T>C
Drug resistance types
10 Sensitive
3 RR-TB
22 HR-TB
12 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 21 |
| La1.7;lineage4.9 | 2 |
| lineage4.9;lineage7 | 2 |
| lineage2.2.1 | 3 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.4.1 | 3 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La3;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| La2;lineage4.9 | 1 |
| lineage3 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR181824 | MDR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR21689978 | Sensitive | lineage2.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR718209 | Sensitive | lineage1.1.1 | th | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | ERR161037 | HR-TB | lineage4.9 | None |
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