lineage | Count |
---|---|
46 | |
lineage1.1.2 | 1 |
La1 | 1 |
lineage4 | 15 |
lineage2.2.1 | 4 |
lineage4.3.4 | 1 |
lineage4.1.2.1 | 2 |
La3 | 1 |
lineage4.9 | 9 |
lineage3 | 1 |
lineage3.1.2 | 1 |
lineage4.3 | 1 |
lineage2.1 | 1 |
lineage4.3.3 | 1 |
lineage4;lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 86 |
ID | Drug resistance | Lineage | Country iso2 | ERR4798406 | HR-TB | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR736875 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR17658565 | Other | lineage3 | None | SRR8692899 | Other | lineage4.9 | None | SRR21732239 | Sensitive | lineage3.1.2 | None | SRR3675456 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675270 | HR-TB | None | ERR176651 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675502 | Other | None | ERR176751 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675550 | Other | None | SRR3675510 | Other | None | SRR3675555 | HR-TB | None | ERR212033 | HR-TB | None | ERR1035162 | Other | None | SRR3675571 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | SRR5341418 | Other | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045450 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR5535933 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045399 | Other | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6046362 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR294266 | HR-TB | None | ERR067681 | HR-TB | None | ERR502889 | Other | None | ERR323108 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR133986 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR10687088 | Sensitive | lineage4.3.3 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3445503 | HR-TB | None | ERR3439432 | Other | None | ERR3797036 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR387051 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None |
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