Rv0001 - c.1140C>G
Drug resistance types
3 Sensitive
1 RR-TB
12 HR-TB
1 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.9 | 11 |
| lineage2.2.1 | 2 |
| lineage1.1.3.1 | 2 |
| 2 | |
| M.canetti;lineage2.2 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 30 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR9786843 | Other | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR12882543 | Sensitive | lineage1.1.3.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR212001 | HR-TB | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None |
|---|
