lineage | Count |
---|---|
lineage4 | 34 |
47 | |
lineage4.9;lineage2.1 | 1 |
lineage4.9 | 9 |
lineage2.2.1 | 6 |
lineage4.2.1 | 1 |
lineage1.1.2 | 1 |
lineage2.2.1.1 | 2 |
lineage4.2.1.1 | 1 |
La2 | 1 |
lineage4.1.2.1 | 6 |
lineage2 | 1 |
lineage3.1.2 | 1 |
lineage3 | 1 |
lineage4.3.4 | 1 |
lineage6 | 1 |
lineage4.6.2.2 | 1 |
lineage2.2 | 1 |
lineage2.1 | 2 |
spoligotype | Count |
---|---|
None | 118 |
ID | Drug resistance | Lineage | Country iso2 | SRR5341400 | HR-TB | lineage4 | None | SRR6045503 | HR-TB | None | SRR5341315 | Sensitive | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341418 | Other | None | SRR5341333 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046802 | Other | lineage4 | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046225 | HR-TB | None | SRR6046362 | HR-TB | None | ERR4798467 | Sensitive | lineage1.1.2 | in | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831638 | Sensitive | None | SRR6046824 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR502889 | Other | None | ERR502510 | Sensitive | lineage4 | None | ERR502524 | HR-TB | La2 | None | ERR3273109 | MDR-TB | lineage4 | None | SRR8217918 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | ERR323053 | HR-TB | None | ERR067681 | HR-TB | None | ERR1063859 | HR-TB | None | ERR133986 | HR-TB | None | ERR323045 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR1035157 | Other | lineage4.9 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3439432 | Other | None | ERR349264 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR373947 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4024991 | Other | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4798406 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR736856 | HR-TB | lineage4 | None | ERR6866022 | Other | None | ERR702406 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR9119669 | HR-TB | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1180996 | HR-TB | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675502 | Other | None | ERR158583 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675222 | Other | None | ERR702405 | Sensitive | lineage2.1 | None | ERR176779 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675265 | Other | lineage4 | None | ERR176651 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR1035162 | Other | None |
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