Rv0668 - c.960C>T
Drug resistance types
4 Sensitive
0 RR-TB
25 HR-TB
5 MDR-TB
7 Pre-XDR-TB
2 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.7 | 1 |
| lineage4.9 | 10 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.2.1 | 12 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.2 | 5 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.2.BCG | 1 |
| lineage2.2.2;lineage4 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage3 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage2 | 1 |
| lineage2.2.1.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage5.2 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.3.4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7496523 | Other | lineage4.7 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SRR6046492 | Other | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR5341456 | Other | lineage4.9 | None | SRR1048966 | MDR-TB | lineage2.2.1 | None | SRR1013630 | Pre-XDR-TB | lineage2.2.2;lineage4 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1049007 | HR-TB | lineage2.2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SAMN02360577 | HR-TB | lineage3 | None | ERR11252736 | Other | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1049040 | HR-TB | lineage2 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1048982 | HR-TB | lineage2.2.1.1 | None | SRR3675248 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR736875 | HR-TB | lineage4.9 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4821025 | Sensitive | lineage3 | gb | SRR7496471 | Sensitive | lineage4 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR1049027 | HR-TB | lineage2.2.2;lineage4.9 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR29050859 | Other | lineage4.9 | None | ERR2514692 | Other | None | ERR4818536 | Other | lineage4.9 | None |
|---|
