Rv0668 - c.960C>T
Drug resistance types
6 Sensitive
0 RR-TB
51 HR-TB
18 MDR-TB
22 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| La1 | 1 |
| lineage4 | 5 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage2.2 | 19 |
| lineage5.2 | 2 |
| lineage2.2.1 | 26 |
| lineage3 | 3 |
| 18 | |
| lineage4.9 | 10 |
| lineage2.2.2 | 13 |
| lineage4;lineage2.2.2 | 1 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.5 | 1 |
| lineage4.9;lineage2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798262 | HR-TB | La1 | None | ERR736875 | HR-TB | lineage4 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013599 | HR-TB | None | SRR1013598 | HR-TB | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013617 | MDR-TB | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013614 | HR-TB | lineage2.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1013618 | MDR-TB | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048885 | MDR-TB | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048983 | HR-TB | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048982 | HR-TB | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049027 | Pre-XDR-TB | None | SRR1049041 | MDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR22528568 | MDR-TB | lineage4.1.1 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR4816322 | Other | lineage4.9 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR4814976 | Other | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR212138 | HR-TB | lineage4 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341456 | Other | None | ERR4819462 | Other | lineage4 | None | ERR2514692 | Other | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SAMN02360577 | HR-TB | lineage3 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045526 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046299 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046492 | Other | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR7496523 | Other | lineage4.7 | None | SRR7496471 | Sensitive | None | SRR6832644 | Other | lineage4.3.3 | None | ERR4821025 | Sensitive | lineage3 | gb | ERR3445504 | HR-TB | None | ERR323068 | Sensitive | lineage4.9 | None |
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