lineage | Count |
---|---|
lineage2.2 | 2 |
lineage2.2.1 | 6 |
lineage4 | 26 |
lineage4.9 | 9 |
29 | |
lineage4.3 | 1 |
lineage3 | 1 |
lineage4.2.1 | 1 |
lineage4.9.1 | 1 |
lineage4.3.4.1 | 2 |
lineage4.3.4.2.1 | 2 |
lineage4.4.1.2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.8 | 3 |
La1 | 1 |
lineage4.3.4 | 1 |
lineage4;lineage3.1 | 1 |
La3 | 1 |
spoligotype | Count |
---|---|
None | 89 |
ID | Drug resistance | Lineage | Country iso2 | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20970016 | Other | lineage2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | ERR8025653 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806982 | Pre-XDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR8692905 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675265 | Other | lineage4 | None | SRR3675387 | Sensitive | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR176751 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR212125 | HR-TB | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046385 | Other | lineage4.9 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR4831638 | Sensitive | None | ERR323045 | HR-TB | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR4818791 | Sensitive | lineage4.1.2.1 | gb | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR12015084 | Other | lineage4.8 | None | ERR108471 | HR-TB | lineage4 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR3283010 | Other | La1 | None | ERR12015086 | Other | lineage4.8 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283040 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR400336 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4798431 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR12015085 | Other | lineage4.8 | None | ERR6359045 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None |
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