Rv0001 - c.793_795delGTAinsAC
Drug resistance types
20 Sensitive
2 RR-TB
18 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 3 |
| La2;lineage4.9 | 1 |
| lineage4.9 | 47 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage5.1.4 | 1 |
| lineage2.2 | 3 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1 | 1 |
| lineage4.1.2.1 | 1 |
| La1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage1.1.1;lineage4 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3 | 2 |
| lineage3;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 74 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR3275450 | Other | lineage4 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR5535933 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR3675455 | Sensitive | lineage4.9 | None |
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