lineage | Count |
---|---|
lineage4.3.4 | 1 |
lineage4.9 | 43 |
lineage4.8 | 1 |
lineage1;lineage4.9 | 1 |
La1;lineage4.1.2 | 1 |
lineage4.1.2.1 | 2 |
lineage2.2 | 3 |
lineage4.9;lineage7 | 3 |
M.canetti;lineage4.9;lineage9 | 1 |
1 | |
La2;lineage2.2 | 1 |
lineage2.2.1 | 6 |
lineage2.1;lineage4.9 | 1 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage2.2.1.2;lineage7 | 1 |
La1.7.X-unk4;lineage4.9 | 1 |
lineage4.1.2 | 1 |
La2;lineage4.9 | 1 |
La1.7.1;La1.7.X-unk4 | 1 |
lineage4.3.2.1 | 1 |
La1.7.1;lineage4.9 | 1 |
lineage4.9;lineage6.1.3 | 1 |
spoligotype | Count |
---|---|
None | 74 |
ID | Drug resistance | Lineage | Country iso2 | ERR736817 | HR-TB | lineage4.3.4 | None | SRR5535933 | Other | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR1063896 | Sensitive | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR176651 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR387051 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR10305695 | Sensitive | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR4769452 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR25515541 | Sensitive | lineage2.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None |
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