Rv1644 - c.-219T>C


Drug resistance types
9 Sensitive 1 RR-TB 29 HR-TB 3 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 31 Other
lineage Counts
lineage Count
lineage4.9 21
La1.7;lineage4.9 5
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.6;La3;lineage4.9 2
lineage4.3.4.1 2
M.canetti;lineage4.9 4
La1.2.BCG 1
La1.7;M.canetti;lineage4.9 3
La1.6;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.8 1
La3;M.canetti;lineage4.9 1
La1.7.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1;lineage4.9 1
lineage1.2.1.2 1
1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.3.4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.7 1
lineage1;lineage4.9 1
La1.2;La1.8.1 1
La1.7.1;La1.7.X-unk4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.9;lineage6.3 1
lineage1.1.1 1
lineage2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 73
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176651 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR161037 Other lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR323037 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675441 Other lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR3675501 Other La1.7;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR6045010 Sensitive lineage4.9 None
ERR4796577 HR-TB None
SRR26399239 Sensitive lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4830353 Other La1.7 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR3675461 RR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR473332 Other lineage4.9 None
ERR176751 Other lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR736831 Other lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR736875 HR-TB lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None