Rv0668 - c.1519_1521delTTGinsCC


Drug resistance types
5 Sensitive 17 RR-TB 39 HR-TB 39 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 14 Other
lineage Counts
lineage Count
lineage2.2.1 8
lineage4.9 40
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La2;lineage2.2 1
lineage2.2.1;lineage3;lineage4 1
lineage3 4
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.7;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage4 1
La1.8.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
M.canetti;lineage4.2;lineage4.9 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage4.9 1
La1.7;lineage4.9 3
lineage4.1.1.3 1
La1.7.1;lineage4.9 1
lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2 1
lineage2.2.1.1 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
2
lineage4.8 1
lineage1;lineage4.9 1
La3;lineage4.3.4 1
lineage2.2.1;lineage4.5 1
lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage6.1.2 1
lineage2.2 1
lineage4.3.4 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.9 1
lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.3.3 1
lineage4.3.4.2.1 1
La2;lineage4.9 2
M.canetti;lineage4.9 1
lineage4.9;lineage9 2
La1.7;lineage3.1;lineage4 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.2;lineage4.9 1
lineage4.9;lineage7 1
La2;lineage4.9;lineage9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 119
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045795 Other lineage2.2.1 None
ERR6866807 RR-TB lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
ERR4798504 RR-TB lineage3 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR6832787 Other lineage2.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR9119669 MDR-TB lineage4.9 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR4798823 HR-TB lineage4 None
ERR3797019 Other La1.8.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR1063858 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1034634 HR-TB lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR987722 MDR-TB None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR9786076 Other lineage3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1172310 MDR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR1063849 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR485006 HR-TB lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR736831 Other lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR12708392 Other lineage2.2.1 None
ERR9787030 RR-TB lineage6.1.2 None
ERR473323 HR-TB lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR4796577 HR-TB None
ERR6359074 HR-TB lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
SRR18002891 MDR-TB lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675446 RR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
SRR6045002 RR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR176778 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4769444 HR-TB lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR473332 Other lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None