Rv1484 - c.351C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
6 Sensitive
2 RR-TB
26 HR-TB
7 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| La1.7;lineage4.9;lineage7 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.9 | 44 |
| M.canetti;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| 10 | |
| lineage2.2.1 | 7 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.6.2.2 | 2 |
| lineage3.1.1 | 1 |
| lineage2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.3 | 2 |
| lineage3.1 | 1 |
| lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1;lineage4.9 | 3 |
| lineage1;lineage4.9 | 1 |
| lineage4.1.1.3 | 2 |
| La3 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La3;lineage2.2.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 103 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR13838015 | Other | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR13837867 | Other | lineage4.9 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | Other | lineage4.9 | None | SRR13837868 | Other | lineage4.9 | None | SRR13837978 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR13837493 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR13837980 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR5341373 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR13837494 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR11465665 | Other | lineage4.1.1.3 | None | SRR13837495 | Sensitive | lineage4.9 | None | ERR4811105 | HR-TB | None | ERR4811142 | RR-TB | None | ERR4811075 | Other | None | SRR28119753 | Other | lineage4.9 | None | SRR29093909 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR13837979 | Other | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR1172728 | RR-TB | La3 | None | SRR13861185 | Other | lineage4.9 | None | SRR13861217 | Other | lineage4.9 | None | SRR13861617 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR29055629 | MDR-TB | lineage2.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR1172951 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196494 | MDR-TB | None | SRR1184312 | Other | lineage2.2.1 | None | SRR13837869 | Other | lineage4.9 | None | SRR29016901 | Other | La3;lineage4.9 | None | ERR4811311 | Other | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1196546 | Other | lineage4.9 | None | SRR13837605 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR13861219 | Other | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR29016780 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR13838014 | Other | lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR1173118 | Other | lineage2.2.1 | None | ERR2514692 | Other | None | ERR212001 | HR-TB | None | SRR28119805 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR1196583 | Other | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None |
|---|
