Rv3596c - c.399G>C
Drug resistance types
37 Sensitive
5 RR-TB
37 HR-TB
6 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 42 |
| lineage4.1.1.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| 27 | |
| lineage2.2.1 | 7 |
| lineage4.9 | 11 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2 | 1 |
| La1.8.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.8 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 107 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341455 | Sensitive | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | SRR6045892 | Sensitive | None | SRR6046617 | HR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323045 | HR-TB | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063858 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR323115 | Sensitive | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3445501 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR6358979 | Other | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR736848 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | SRR10808805 | Sensitive | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR26399491 | Sensitive | lineage1.1.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR3675555 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4817915 | RR-TB | lineage4.9 | None |
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