lineage | Count |
---|---|
La1.2 | 1 |
lineage3 | 1 |
lineage4.9 | 9 |
M.canetti;lineage4.9 | 1 |
lineage4.9;lineage9 | 2 |
lineage3.1.2.2 | 1 |
2 | |
lineage4.3.4 | 1 |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
lineage4.6.2.2 | 2 |
La1.7.1;La1.7.X-unk4 | 1 |
lineage4.3.2;lineage4.9 | 1 |
lineage4.1;lineage4.8 | 2 |
La2;lineage4.9;lineage9 | 1 |
La1.7.1;lineage4.9 | 1 |
La2;lineage4.9 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 30 |
ID | Drug resistance | Lineage | Country iso2 | SRR23961549 | Other | La1.2 | None | ERR4798504 | RR-TB | lineage3 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR9786843 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR181887 | Other | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6044835 | Other | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR987722 | MDR-TB | None |
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