Rv0676c - c.1290C>G
Drug resistance types
3 Sensitive
1 RR-TB
102 HR-TB
9 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| 107 | |
| lineage4.9 | 11 |
| lineage4.1.2.1 | 4 |
| lineage3.1 | 3 |
| La2 | 1 |
| lineage4 | 13 |
| lineage4.8 | 1 |
| lineage2 | 3 |
| lineage3 | 1 |
| lineage4.3.4 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage2.2.1 | 6 |
| lineage4.3.4.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.9;La3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3 | 1 |
| lineage2.2 | 1 |
| lineage4.1;lineage1 | 1 |
| La1.8.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 169 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045526 | HR-TB | None | SRR6046066 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325444 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325447 | HR-TB | None | ERR323036 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311099 | HR-TB | None | ERR502532 | HR-TB | None | SRR7535086 | Other | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283017 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR11049020 | Other | lineage4.8 | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR4407463 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4811022 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR5336148 | Other | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736867 | HR-TB | None | ERR9119669 | HR-TB | None | ERR736874 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | SRR1169194 | Other | None | SRR10809074 | Sensitive | lineage4 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1172234 | Other | None | SRR1173118 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173166 | Other | lineage4.9 | None | SRR1173153 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173384 | Other | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1184294 | HR-TB | None | SRR1173778 | Other | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1175049 | RR-TB | None | SRR1175090 | Other | lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1196768 | MDR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR14801749 | Sensitive | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR19303884 | HR-TB | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19304036 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR20969677 | HR-TB | lineage2 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR3675482 | HR-TB | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR2027263 | Other | lineage4 | None | SRR3675311 | Other | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675383 | HR-TB | None | ERR4816999 | Other | None | SRR3675558 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212033 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | SRR3675574 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675572 | Other | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4818018 | HR-TB | lineage2.2.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818615 | Other | None | ERR234659 | HR-TB | None | ERR4818347 | Other | lineage4.1.2 | None | SRR5341302 | HR-TB | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2514692 | Other | None | SRR5007188 | Other | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341333 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | ERR2693239 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl |
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