lineage | Count |
---|---|
lineage4 | 22 |
42 | |
lineage4.9 | 9 |
lineage4;lineage3.1 | 1 |
lineage4.3.4 | 1 |
lineage2.2.1.1 | 2 |
lineage1.1.3.2 | 1 |
lineage2.2.1 | 5 |
lineage4.8 | 3 |
lineage4.1.2.1 | 3 |
lineage2.1 | 1 |
lineage3 | 2 |
lineage4.6.2.2 | 1 |
lineage4.1 | 1 |
lineage4.2.1.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.3.4.1 | 2 |
lineage4.3.4.2.1 | 2 |
lineage4.7 | 1 |
lineage4.1.2 | 1 |
La2 | 1 |
lineage4.3.3 | 1 |
lineage4.4.1.2 | 1 |
La1 | 1 |
spoligotype | Count |
---|---|
None | 106 |
ID | Drug resistance | Lineage | Country iso2 | ERR3797047 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4596910 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR4798406 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6359070 | Other | lineage4.9 | None | ERR751326 | Sensitive | lineage4 | None | SRR1184024 | Other | lineage2.2.1.1 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR9634265 | Sensitive | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1180270 | Other | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR3675502 | Other | None | SRR20632814 | Sensitive | lineage4 | None | ERR2027263 | Other | lineage4 | None | ERR158583 | HR-TB | None | SRR3675510 | Other | None | ERR2229542 | Other | lineage4.8 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4817060 | RR-TB | None | ERR4816470 | Other | lineage3 | None | ERR4817735 | Other | lineage4.8 | None | SRR5341418 | Other | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR1035162 | Other | None | ERR4818284 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR1023509 | Other | None | SRR5341315 | Sensitive | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR5341333 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6046482 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6046824 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6789626 | Other | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR067681 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1034652 | Other | None | ERR1035122 | Sensitive | None | ERR3283010 | Other | La1 | None | ERR1063855 | Other | lineage4 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR133986 | HR-TB | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3439432 | Other | None |
---|