Rv0668 - c.3378C>T


Drug resistance types
22 Sensitive 5 RR-TB 22 HR-TB 12 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 35 Other
lineage Counts
lineage Count
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.9 27
lineage4.4.1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.1.2.1 3
La3;lineage4.9 10
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7;lineage4.9;lineage7 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage2.2.1 2
La1.7;lineage3.1;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
lineage4.1.1.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1.1.3.2 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.3.4.1 2
lineage4.9;lineage6.3 2
La1.7;lineage4.9 3
lineage4.3.4.2.1 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.9;lineage6.1.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.4 1
La3;lineage4 1
lineage4.1.2 1
lineage4.3.1;lineage4.9;lineage6 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.9;lineage9 2
La1.7;lineage3;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage2.2.1.1 1
2
lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.6.2.2 1
lineage4.3.3 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4 1
spoligotype Counts
spoligotype Count
None 98
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1023509 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR1183111 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR7131023 Other lineage4.1.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769474 HR-TB lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR3283021 HR-TB lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR736817 HR-TB lineage4.3.4 None
ERR3283028 Other La3;lineage4 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341400 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR3797048 Other La3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4817060 Other None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR5341332 Pre-XDR-TB lineage3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
ERR2027263 Other lineage4 None
SRR6789626 Other None
ERR3283047 Sensitive La3;lineage4.9 None
ERR751326 Other lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None