lineage | Count |
---|---|
lineage4.9 | 12 |
lineage4.9;lineage7 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage4.1.2 | 1 |
lineage4.9;lineage9 | 1 |
M.canetti;lineage1 | 1 |
lineage2.1;lineage4.1.4;lineage4.9 | 1 |
lineage4.3.2.1 | 1 |
La2;lineage4.9;lineage9 | 1 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
lineage2.2.1 | 1 |
lineage2.2 | 2 |
1 | |
lineage6.1.3 | 1 |
La1.2;La1.8.1 | 1 |
lineage3.1.2.2 | 1 |
La1;lineage4.9 | 1 |
lineage4.3.4 | 1 |
spoligotype | Count |
---|---|
None | 30 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046133 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR28351342 | HR-TB | lineage2.2.1;lineage4 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR25827778 | MDR-TB | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR987722 | MDR-TB | None | ERR137286 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR16156817 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None |
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