Rv2245 - c.1089C>T
Drug resistance types
23 Sensitive
0 RR-TB
16 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.9 | 19 |
| lineage4.3.3 | 16 |
| lineage4.3.4.1 | 1 |
| lineage3 | 5 |
| lineage4 | 1 |
| lineage2.2.1 | 2 |
| La1;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 55 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR14164879 | Sensitive | lineage4.3.3 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR2513011 | Sensitive | lineage3 | gb | SRR11662690 | HR-TB | lineage4.9 | None | ERR11050092 | Sensitive | lineage4.3.3 | None | SRR14164810 | Sensitive | lineage4.3.3 | None | ERR181824 | MDR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR2432984 | HR-TB | lineage4.3.3 | br | ERR176651 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR7363075 | Sensitive | lineage4.3.3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR7363115 | Sensitive | lineage4.3.3 | None | SRR6046593 | Other | lineage4.9 | None | SRR7068899 | Sensitive | lineage3 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR11050371 | Sensitive | lineage4.3.3 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR7068994 | Sensitive | lineage3 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3838812 | Sensitive | lineage4.3.3 | None | SRR14165022 | Sensitive | lineage4.3.3 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR7070109 | Sensitive | lineage3 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR14164862 | Sensitive | lineage4.3.3 | None | SRR5341456 | Other | lineage4.9 | None | SRR14165138 | Sensitive | lineage4.3.3 | None | SRR12931745 | Sensitive | lineage4.3.3 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR2653047 | Sensitive | lineage4.3.3 | None | ERR4814017 | Sensitive | lineage4.3.3 | br | ERR181887 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR14165075 | Sensitive | lineage4.3.3 | None | SRR14165051 | Sensitive | lineage4.3.3 | None | ERR4816511 | Sensitive | lineage3 | gb | ERR1063862 | HR-TB | lineage4.9 | None |
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