Rv1484 - c.525G>C
Drug resistance types
33 Sensitive
2 RR-TB
36 HR-TB
10 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 3 |
| lineage2.2 | 3 |
| lineage4.9 | 63 |
| lineage2.2.1 | 5 |
| La1.2;La1.8.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La3;lineage4.3.4 | 1 |
| La3;lineage4.9 | 8 |
| La1;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage2.2.1.1 | 1 |
| lineage3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7 | 2 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.2;lineage4.9 | 2 |
| 1 | |
| lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.5 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.6;lineage4 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 124 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR6045053 | Other | lineage4 | None |
| SRR20969708 | HR-TB | lineage2.2 | None |
| ERR926162 | Sensitive | lineage4.9 | None |
| ERR323107 | Sensitive | lineage4.9 | None |
| SRR6045526 | Other | lineage4.9 | None |
| ERR736856 | Sensitive | lineage4.9 | None |
| SRR14782054 | Other | lineage4.9 | None |
| ERR181887 | Other | lineage4.9 | None |
| SRR13423649 | Sensitive | lineage2.2.1 | None |
| SRR7240033 | Other | La1.2;La1.8.1 | None |
| ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None |
| ERR161039 | HR-TB | La3;lineage4.3.4 | None |
| ERR3283011 | Other | La3;lineage4.9 | None |
| SRR10808805 | Other | La1;lineage4.9 | None |
| ERR4815441 | HR-TB | lineage4.9 | None |
| ERR926163 | Other | lineage4.9 | None |
| ERR108471 | HR-TB | lineage4.9 | None |
| ERR4819877 | HR-TB | lineage4.9 | None |
| SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
| SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| ERR369157 | Sensitive | lineage4.9 | None |
| ERR5311094 | HR-TB | lineage4.9 | None |
| SRR29051386 | Sensitive | lineage4.9 | None |
| SRR6079962 | HR-TB | lineage2.2.1.1 | None |
| SRR20970016 | Other | lineage2.2 | None |
| SRR28044873 | Pre-XDR-TB | lineage3 | None |
| ERR4819422 | HR-TB | lineage4.9 | None |
| ERR926165 | Sensitive | lineage4.9 | None |
| SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR926155 | Sensitive | lineage4.9 | None |
| ERR4819241 | Other | lineage4.9 | None |
| ERR9786986 | HR-TB | lineage4.1.2.1 | None |
| SRR28351584 | HR-TB | lineage2.2.1 | None |
| SRR5535933 | Other | lineage4.9 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| SRR3675501 | Other | La1.7;lineage4.9 | None |
| SRR17658565 | Pre-XDR-TB | lineage3 | None |
| ERR736848 | Other | lineage4.9 | None |
| SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None |
| ERR4830353 | Other | La1.7 | None |
| ERR1063857 | MDR-TB | La2;lineage4.9 | None |
| SRR10809074 | Sensitive | lineage4.9 | None |
| ERR3283014 | Sensitive | La3;lineage4.9 | None |
| ERR3283030 | HR-TB | lineage4.9 | None |
| ERR3283031 | Sensitive | La3;lineage4.9 | None |
| SRR6046133 | HR-TB | lineage4.9 | None |
| SRR6045347 | Other | lineage4.9 | None |
| SRR29096879 | Sensitive | lineage4.9 | None |
| ERR4819051 | Sensitive | lineage4.9 | None |
| ERR3283047 | Sensitive | La3;lineage4.9 | None |
| ERR3797063 | Sensitive | La3;lineage4.9 | None |
| ERR926158 | Sensitive | lineage4.9 | None |
| ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None |
| ERR1063846 | HR-TB | lineage4.9 | None |
| ERR926161 | Sensitive | lineage4.9 | None |
| ERR3283021 | HR-TB | lineage4.9 | None |
| SRR26399265 | Other | lineage2.2.1 | None |
| ERR926159 | Sensitive | lineage4.9 | None |
| SRR29096387 | Sensitive | M.canetti;lineage4.9 | None |
| ERR971389 | Sensitive | lineage4.9 | None |
| SRR8217918 | HR-TB | lineage4.9 | None |
| ERR3797064 | Other | La3;lineage4.9 | None |
| SRR3675449 | Other | M.canetti;lineage4.9 | None |
| ERR3797047 | MDR-TB | lineage4.9 | None |
| SRR14782405 | HR-TB | lineage4.9 | None |
| ERR323056 | HR-TB | lineage4.4.1.2 | None |
| SRR12416840 | MDR-TB | lineage4.9 | None |
| ERR11465352 | Sensitive | lineage4.3.4.1 | None |
| ERR1034634 | HR-TB | lineage4.9 | None |
| ERR11465353 | Sensitive | lineage4.3.4.1 | None |
| ERR4769452 | Other | lineage4.9 | None |
| ERR4796929 | Sensitive | lineage4.9 | None |
| SRR6046485 | Other | lineage4.9 | None |
| ERR4800527 | MDR-TB | lineage2.2.1 | None |
| SRR11662690 | HR-TB | lineage4.9 | None |
| SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None |
| ERR2514692 | Other | None | |
| SRR28351339 | MDR-TB | lineage4 | None |
| SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None |
| ERR3445502 | Sensitive | lineage4.9;lineage7 | None |
| SRR6045555 | Other | lineage4.9 | None |
| SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR6045010 | Sensitive | lineage4.9 | None |
| ERR4818929 | HR-TB | lineage4.9 | None |
| ERR3283040 | HR-TB | lineage4.9 | None |
| SRR3675222 | Other | La1.7 | None |
| ERR3797029 | Other | lineage4.9 | None |
| SRR6044875 | Sensitive | lineage4.9 | None |
| ERR736817 | HR-TB | lineage4.3.4 | None |
| ERR1063839 | MDR-TB | La2;lineage2.2 | None |
| ERR4188247 | HR-TB | lineage4.9 | None |
| SRR6046046 | Other | lineage4.9 | None |
| ERR4820773 | HR-TB | lineage4.9 | None |
| ERR3797048 | Other | La3;lineage4.9 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR20969731 | Other | lineage2.2.1 | None |
| ERR323045 | HR-TB | lineage1;lineage4.9 | None |
| ERR3797015 | HR-TB | lineage4.9 | None |
| ERR4769521 | RR-TB | lineage4.9 | None |
| SRR16156817 | Other | lineage4.9 | None |
| SRR5341330 | Other | lineage4.9 | None |
| ERR212123 | Other | lineage4.9 | None |
| SRR6045219 | HR-TB | lineage4.9 | None |
| ERR161037 | Other | lineage4.9 | None |
| ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None |
| SRR29096659 | Sensitive | lineage4.9 | None |
| SRR14519676 | Sensitive | lineage4.5 | None |
| ERR4817731 | HR-TB | lineage4.9 | None |
| SRR26159035 | Sensitive | lineage4.9 | None |
| ERR4816478 | HR-TB | lineage4 | None |
| ERR926164 | Other | lineage4.9 | None |
| ERR4816656 | Other | lineage4.9 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR3675488 | Other | La1.7;lineage4.9 | None |
| SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None |
| ERR926156 | Sensitive | lineage4.9 | None |
| SRR28351554 | Sensitive | La1.6;lineage4 | None |
| ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
| ERR926157 | Sensitive | lineage4.9 | None |
| ERR181744 | HR-TB | La3;lineage4.9 | None |
| SRR3675385 | Other | La1.7;lineage4.9 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR4810624 | MDR-TB | lineage2.2 | None |
