lineage | Count |
---|---|
lineage4.3.4 | 1 |
lineage4.3.3 | 2 |
47 | |
lineage4 | 8 |
lineage4.3.2 | 1 |
lineage2.2 | 4 |
lineage4.4.1.1 | 2 |
lineage4.1.2.1 | 4 |
lineage2.2.1 | 4 |
lineage4.9 | 8 |
lineage4.5 | 1 |
lineage4.1 | 1 |
lineage4.1.1.3 | 1 |
lineage3 | 1 |
lineage1.1 | 1 |
lineage3.1 | 2 |
La1.8.1 | 1 |
lineage4;lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 90 |
ID | Drug resistance | Lineage | Country iso2 | ERR736817 | HR-TB | lineage4.3.4 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358837 | HR-TB | None | ERR736839 | Other | None | ERR8976043 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR1173453 | Other | lineage4.4.1.1 | None | ERR9119096 | Other | lineage4.3.3 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR13837796 | Sensitive | lineage4.9 | None | SRR1183049 | Other | lineage2.2 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR3675482 | HR-TB | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR13861646 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR3675488 | HR-TB | None | ERR161033 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675486 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | SRR3675558 | HR-TB | None | ERR4818929 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR278594 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325442 | HR-TB | None | ERR294248 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR5311099 | HR-TB | None | ERR323036 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311081 | HR-TB | None | ERR323055 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | SRR7796666 | Pre-XDR-TB | lineage2.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR3445503 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063858 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769474 | HR-TB | lineage4 | None |
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