Rv1484 - c.-286A>C
Drug resistance types
22 Sensitive
4 RR-TB
44 HR-TB
13 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
92 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 47 |
| lineage4.1.2.1 | 5 |
| 19 | |
| lineage2.1 | 5 |
| lineage4.9;lineage6.3 | 7 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.8 | 3 |
| lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage2.1;lineage4.9 | 10 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| La2;lineage2.2 | 1 |
| lineage4.3.3 | 1 |
| lineage2.1;lineage6.3 | 2 |
| M.canetti;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.1.3 | 2 |
| La3 | 2 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1 | 6 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 9 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La1.8.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage3 | 2 |
| lineage6.1.3 | 2 |
| La1.2;La1.8.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage3.1 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage6.3.1 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 181 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10808730 | Other | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR13291887 | Sensitive | lineage2.1 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR9786569 | Other | lineage4.8 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR21709618 | Sensitive | lineage2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR6358979 | Other | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR1172817 | Other | La3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR7496472 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR4816151 | Sensitive | lineage4.8 | None | ERR502912 | Other | lineage2.2.1 | None | ERR2517090 | MDR-TB | lineage2.2.1 | gb | ERR9786642 | Other | lineage4.1.2.1 | None | SRR28351342 | HR-TB | lineage2.2.1;lineage4 | None | ERR987722 | MDR-TB | None | ERR212001 | HR-TB | None | SRR28119805 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR1173363 | Other | None | SRR3675572 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196583 | Other | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR18213713 | HR-TB | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR1175074 | Other | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1791747 | Other | La1.8.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184312 | Other | lineage2.2.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR1035157 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR1173384 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7535086 | Other | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4800341 | Other | lineage3 | None | SRR1172728 | RR-TB | La3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1172234 | Other | lineage4.9 | None | SRR7496509 | Other | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR5341467 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4817575 | Sensitive | lineage3.1.2.1 | None | SRR1184381 | MDR-TB | None | SRR25827682 | Other | None | ERR9787197 | Other | None | ERR234659 | Other | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR9786604 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR1172951 | Other | lineage4.9 | None | SRR1196768 | MDR-TB | None | ERR137286 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR7496517 | Other | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR4816999 | Other | None | ERR9786617 | Other | lineage4.1.1.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR14066533 | Sensitive | lineage1.1.1 | None |
|---|
