lineage | Count |
---|---|
lineage4.9 | 24 |
La1.7;lineage4.9;lineage7 | 3 |
La1.7;M.canetti;lineage4.9 | 1 |
La1.7;lineage3.1;lineage4 | 1 |
M.canetti;lineage4.9 | 1 |
La1.7;lineage4.9 | 1 |
lineage4.2;lineage4.8.1;lineage4.9 | 2 |
lineage4.4.1.2 | 1 |
lineage2.2 | 2 |
lineage4.3.4 | 1 |
lineage4.2;lineage4.9 | 2 |
lineage1;lineage4.9 | 1 |
La3;lineage4.3.4 | 1 |
lineage4 | 2 |
lineage2.2.1 | 2 |
La3;lineage4.9 | 2 |
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage4.9;lineage7 | 1 |
lineage1.2.1.2 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
La1.7;lineage3;lineage4.9;lineage7 | 1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | ERR4820773 | HR-TB | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR181887 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4769452 | Other | lineage4.9 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR14782054 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None |
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