Rv0005 - c.1995C>T


Drug resistance types
4 Sensitive 3 RR-TB 41 HR-TB 5 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 56 Other
lineage Counts
lineage Count
lineage2.2.1 5
lineage1.2.1.2 3
lineage4.9 32
lineage2.1;lineage4.9 9
lineage1.1.2 1
lineage4.1.3 2
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage2.1;lineage4.9;lineage6.3 9
La3;lineage4.9 4
La1.7 1
M.canetti;lineage2.1;lineage4.9 2
lineage3 2
La3 2
lineage4.1.2.1 3
7
La3;lineage2.1;lineage4.9 3
lineage2.2.1;lineage6.3 1
lineage3.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 3
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage6.3 1
lineage4.1.2 1
lineage4.3.4.2.1 2
M.canetti;lineage4.9 1
lineage4.1.1.1 1
lineage1.2.2.2 1
lineage2.1 2
lineage4.3.4.1 1
lineage4.3.4 1
lineage4.1.1.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 112
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184312 Other lineage2.2.1 None
ERR7902748 Sensitive lineage1.2.1.2 None
SRR6045526 Other lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR3804169 HR-TB lineage4.1.3 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341461 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1172951 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR26111975 Sensitive lineage1.2.1.2 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
SRR5341467 Other lineage4.9 None
SRR1172817 Other La3 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
SRR3675236 Other None
ERR4817060 Other None
SRR1196583 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4798099 HR-TB lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR736834 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR28860097 Sensitive lineage1.2.1.2 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR234659 HR-TB None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5341300 HR-TB lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR736875 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR1172728 RR-TB La3 None
SRR12416842 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR4800590 MDR-TB lineage1.2.2.2 in
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR137286 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR10315587 RR-TB lineage4.1.1.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None