lineage | Count |
---|---|
59 | |
lineage4;lineage3.1 | 1 |
lineage4.1.2.1 | 5 |
lineage4 | 72 |
lineage2.2.1 | 5 |
lineage4.3.4 | 1 |
lineage6 | 1 |
lineage4.1.1 | 1 |
lineage4.9 | 13 |
lineage3;lineage2.2.1 | 1 |
La1.8.1 | 1 |
lineage4.1 | 1 |
lineage4;lineage2.2.1 | 1 |
lineage2.1 | 1 |
lineage4.9;lineage2.1 | 1 |
lineage4.2.1 | 1 |
lineage4.1.2 | 1 |
lineage2.2.1.1 | 1 |
lineage4.3.2.1 | 1 |
spoligotype | Count |
---|---|
None | 168 |
ID | Drug resistance | Lineage | Country iso2 | ERR4024991 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6358837 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866639 | Other | None | ERR751326 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR9787165 | Other | lineage6 | None | ERR8976043 | HR-TB | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR14782405 | HR-TB | None | SRR1173777 | Other | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR25827407 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR1640750 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR3675482 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR25827561 | Pre-XDR-TB | lineage4;lineage2.2.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675265 | Other | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR6045503 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR278594 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045952 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046046 | Other | None | SRR6325444 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6325447 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR1035122 | Sensitive | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323043 | HR-TB | None | ERR323045 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR3468544 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797083 | HR-TB | None |
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