lineage | Count |
---|---|
49 | |
lineage4 | 4 |
lineage4.1.2.1 | 6 |
lineage3.1 | 2 |
lineage4.9 | 5 |
La1.8.1 | 1 |
La1.2 | 1 |
lineage4.3.4 | 2 |
lineage2 | 1 |
lineage4.4.1.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage2.2.1 | 3 |
lineage4.1.1.3 | 1 |
lineage1.2.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 78 |
ID | Drug resistance | Lineage | Country iso2 | ERR278594 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6045952 | HR-TB | None | SRR6045399 | Other | None | SRR6325448 | HR-TB | None | ERR4830353 | Other | None | SRR6325444 | HR-TB | None | SRR6046492 | Other | None | SRR6046514 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325447 | HR-TB | None | ERR323063 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323045 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3283017 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3797014 | Other | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR6358837 | HR-TB | None | ERR4188350 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR069989 | HR-TB | lineage2 | None | ERR736875 | HR-TB | lineage4 | None | ERR8976043 | HR-TB | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861549 | RR-TB | lineage4.9 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675488 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675222 | Other | None | ERR181887 | HR-TB | None | ERR212123 | Other | None | SRR3675383 | HR-TB | None | ERR212034 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR212138 | HR-TB | lineage4 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816656 | HR-TB | None | ERR4819051 | Other | lineage4 | None | ERR2693239 | HR-TB | None | ERR4818929 | HR-TB | None | SRR6153088 | Sensitive | lineage1.2.1.2.1 | ca | ERR2446563 | Other | lineage2.2.1 | nl | ERR2509673 | Other | lineage2.2.1 | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None |
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