Rv3596c - c.1293T>C


Drug resistance types
17 Sensitive 2 RR-TB 22 HR-TB 3 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 28 Other
lineage Counts
lineage Count
lineage4.9 33
lineage4.3.4 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7;lineage4.9;lineage7 3
lineage4.8.1 1
lineage1;lineage4.9 1
lineage4.8 2
lineage1.1.2 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.6;La3;lineage4.6.4;lineage4.9 1
La2;lineage4.9 1
La1.6;La3;lineage4.9 2
lineage3.1.2.1 1
lineage4.1.2.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;M.canetti;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La2;lineage2.2 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La1.7.1;La1.7.X-unk4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.7.1;lineage4.9 1
lineage1.1.3.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.7;lineage4.2 1
La1.2.BCG 1
lineage1.1.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 73
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341373 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR6046593 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4797193 HR-TB lineage1.1.2 None
ERR779852 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR176778 HR-TB lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046046 Other lineage4.9 None
ERR13285068 Sensitive lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR29096943 Sensitive lineage3.1.2.1 None
SRR14801749 HR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR29017081 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR11067475 Sensitive lineage4.8 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR6359069 Sensitive lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR473332 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR10808730 Other lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR176651 Other lineage4.9 None