EBG00000313339 - n.1431A>G
Drug resistance types
16 Sensitive
6 RR-TB
26 HR-TB
7 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9;lineage7 | 3 |
| La2;lineage2.2 | 1 |
| lineage4.9 | 33 |
| La1.8.1 | 3 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.9;lineage7 | 3 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.1 | 3 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2 | 1 |
| lineage4.8 | 2 |
| lineage3 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage1.1.1 | 2 |
| lineage6.1.3 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.3.4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage4.6.1.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.4 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage6.1.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 78 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR7070627 | Other | La1.8.1 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR067712 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR3675582 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR176651 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR10808730 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR2512838 | Other | La1.8.1 | gb | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None |
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