EBG00000313339 - n.2388G>A


Drug resistance types
19 Sensitive 7 RR-TB 19 HR-TB 6 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 17 Other
lineage Counts
lineage Count
lineage4.9 22
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.4 1
lineage3 1
lineage2.2.1 5
lineage3.1 2
La1.7;lineage4.9 2
lineage6.1.3 1
lineage4.3.4.2 4
lineage2.2.1.1 4
La1.3 4
La1;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.8 2
lineage4.3.4.1 1
La2;lineage2.2 1
La2;lineage4.9 1
lineage1;lineage4.9 1
La1.7.1;lineage4.9 1
La1.8.1 2
lineage6.1.2 1
lineage4.2;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
lineage4.3.4.2.1 1
lineage2.1;lineage4.9 1
La2 1
M.canetti;lineage1 1
lineage4.9;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.3.3 1
lineage1.1.2;lineage6.2.3 1
spoligotype Counts
spoligotype Count
None 70
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283040 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR13180204 Other lineage3 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR551397 Sensitive lineage3.1 de
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR9786346 Sensitive lineage4.3.4.2 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
ERR4769555 Sensitive La1.3 None
ERR181824 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1175474 Other lineage4.9 None
SRR6855695 Sensitive lineage4.8 None
SRR6045010 Sensitive lineage4.9 None
SRR1175472 RR-TB lineage4.3.4.1 None
ERR176651 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR26112082 Sensitive lineage4.3.4.2 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4769552 Sensitive La1.3 None
SRR1181091 Other lineage2.2.1.1 None
ERR1063849 HR-TB lineage4.9 None
ERR4769516 Sensitive lineage4.9 None
SRR1792022 Other La1.8.1 None
ERR212125 HR-TB lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4818110 Sensitive lineage4.9 None
ERR4769514 Other La1.3 None
ERR1063858 HR-TB lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR2515230 Sensitive lineage4.8 None
ERR4769408 Other La1.3 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR13888750 Other La2 None
SRR15014655 Other M.canetti;lineage1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR29053101 Sensitive lineage4.3.4.2 None
SRR1180172 Other lineage2.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR1792011 Other La1.8.1 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR30182298 Sensitive lineage3.1 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
SRR26112186 Sensitive lineage4.3.4.2 None