EBG00000313339 - n.2388G>A
Drug resistance types
19 Sensitive
7 RR-TB
19 HR-TB
6 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9 | 22 |
| La2;lineage4.9 | 1 |
| lineage2.2.1 | 5 |
| La2 | 1 |
| M.canetti;lineage1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.3.3 | 1 |
| lineage6.1.2 | 1 |
| lineage2.2.1.1 | 4 |
| lineage1.1.2;lineage6.2.3 | 1 |
| La1.3 | 4 |
| La1;lineage4.9 | 1 |
| lineage4.8 | 2 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage3.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage3 | 1 |
| La1.8.1 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 70 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | ERR4769555 | Sensitive | La1.3 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1175474 | Other | lineage4.9 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4769408 | Other | La1.3 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR29053101 | Sensitive | lineage4.3.4.2 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR30182298 | Sensitive | lineage3.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR26112186 | Sensitive | lineage4.3.4.2 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR13180204 | Other | lineage3 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR26112082 | Sensitive | lineage4.3.4.2 | None | ERR551397 | Sensitive | lineage3.1 | de | ERR181887 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | ERR4769514 | Other | La1.3 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR176651 | Other | lineage4.9 | None |
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