lineage | Count |
---|---|
lineage2.2.1.1 | 1 |
lineage4 | 71 |
lineage2.2.1 | 7 |
54 | |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.4.1.2 | 1 |
lineage4.9 | 7 |
lineage4.1.2.1 | 4 |
lineage3 | 2 |
lineage3.1.2 | 1 |
lineage2.2 | 1 |
lineage4.3.4 | 1 |
lineage6.1.3 | 1 |
lineage3;lineage2.2.1 | 1 |
La1.2 | 1 |
lineage4.2;La1.7 | 1 |
lineage4;lineage2.2.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 158 |
ID | Drug resistance | Lineage | Country iso2 | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046802 | Other | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR323039 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323045 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063857 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283025 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283031 | HR-TB | None | ERR349296 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769521 | HR-TB | None | ERR6866639 | Other | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798431 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866022 | Other | None | ERR4798099 | Other | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359045 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | SRR1173777 | Other | lineage4 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | ERR9787256 | Other | lineage6.1.3 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR25827407 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR17658565 | Other | lineage3 | None | SRR23961549 | Other | La1.2 | None | SRR14782405 | HR-TB | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR25827778 | MDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR25827561 | Pre-XDR-TB | lineage4;lineage2.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176779 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675510 | Other | None | SRR3675574 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4818929 | HR-TB | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4816656 | HR-TB | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341425 | Other | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | SRR6045503 | HR-TB | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045555 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6046133 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046046 | Other | None | SRR6045327 | HR-TB | None |
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