Rv1484 - c.-403T>C
Drug resistance types
26 Sensitive
3 RR-TB
22 HR-TB
2 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 53 |
| lineage3.1 | 1 |
| La1.7;lineage4.2 | 1 |
| La1.2 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4 | 3 |
| lineage2.2.1 | 4 |
| lineage3 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.2.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.2.1;lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 86 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29055944 | Sensitive | lineage4.9 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR363447 | Other | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR23961549 | Other | La1.2 | None | SRR6046485 | Other | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR25827561 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4798099 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR3675246 | Other | lineage4.9 | None | SRR25827778 | MDR-TB | lineage2.2.1 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR29017081 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR28351342 | HR-TB | lineage2.2.1;lineage4 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR6045053 | Other | lineage4 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR373947 | Other | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR28044591 | Sensitive | lineage1.1.2 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR25827407 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None |
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