Rv0006 - c.-704C>G
Drug resistance types
33 Sensitive
2 RR-TB
52 HR-TB
19 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
79 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 11 |
| lineage4.9 | 53 |
| lineage4 | 4 |
| La1.7;M.canetti;lineage4.9 | 2 |
| 17 | |
| M.canetti;lineage2.1;lineage4.9 | 9 |
| lineage4.1.3 | 2 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.7;lineage4.9 | 4 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| lineage2.2.1 | 6 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 5 |
| lineage4.3.4 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.2.1.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.1 | 1 |
| lineage2.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| lineage4.9;lineage6.3 | 5 |
| lineage4.1.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.1.1.3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.9;lineage9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.8 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2.1.1 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 188 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4800341 | Other | None | ERR4811105 | HR-TB | None | SRR6789626 | Other | None | ERR4810741 | HR-TB | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4811142 | RR-TB | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR9117721 | HR-TB | None | ERR349298 | Sensitive | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR363445 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR29017081 | Sensitive | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR234659 | Other | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR9786604 | Other | None | SRR3675572 | Other | None | ERR926157 | Sensitive | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | ERR369158 | Other | lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR29097058 | Other | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4811075 | Other | None | ERR4811311 | Other | None | SRR28119753 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR29093909 | Other | lineage4.9 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR6045371 | Other | lineage4.9 | None | SRR3675236 | Other | None | ERR363509 | Sensitive | lineage4.9 | None | ERR8976043 | HR-TB | lineage2.2 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | lineage2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR702406 | Other | lineage2.1 | None | SRR6325442 | HR-TB | lineage4.1.1;lineage4.9 | None | SRR6325447 | HR-TB | lineage4.1.1.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR29096246 | Sensitive | La1.7;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR212001 | HR-TB | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR349264 | Sensitive | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR5311098 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR1035157 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR9786617 | Other | lineage4.1.1.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR926163 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR12882241 | Sensitive | lineage1.1.3.2 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046485 | Other | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR10808730 | Other | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR3675457 | Other | lineage4.9 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
|---|
