Rv0486 - c.618C>G
Drug resistance types
30 Sensitive
3 RR-TB
122 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage2.2.1 | 2 |
| lineage4.1 | 1 |
| 133 | |
| lineage4.3.4 | 2 |
| lineage4 | 37 |
| lineage4.3 | 1 |
| lineage4.9 | 10 |
| La1.8.1 | 1 |
| lineage4.1.2 | 3 |
| lineage4.3.4.1 | 1 |
| La2 | 1 |
| lineage4.3.2.1 | 1 |
| La1 | 1 |
| lineage4.1.3 | 2 |
| lineage2 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2 | 2 |
| lineage3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.1.2 | 1 |
| La3 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 208 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161033 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675234 | Other | None | SRR3675311 | Other | None | SRR3675246 | Sensitive | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | SRR3675383 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | SRR3742665 | HR-TB | None | ERR212121 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR4818929 | HR-TB | None | ERR4818347 | Other | lineage4.1.2 | None | SRR5341453 | Sensitive | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR2514692 | Other | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341302 | HR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341313 | HR-TB | None | ERR2693239 | HR-TB | None | SRR5341333 | HR-TB | None | ERR2693231 | Other | None | SRR5341469 | Other | lineage4 | None | ERR2693230 | Other | None | ERR2693257 | Other | None | ERR2693254 | Other | None | ERR2693232 | Other | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR6325442 | HR-TB | None | ERR294248 | HR-TB | None | SRR6789626 | Other | None | SRR6797801 | MDR-TB | lineage4 | None | ERR502524 | HR-TB | La2 | None | ERR502510 | Sensitive | lineage4 | None | ERR323041 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | SRR7496509 | Other | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7496517 | Other | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR3283014 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323063 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283027 | HR-TB | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797014 | Other | None | ERR3797015 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797017 | Other | None | ERR3797064 | Sensitive | None | ERR3797071 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188350 | HR-TB | None | ERR5336148 | Other | None | ERR4796254 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR4407463 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR702404 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | ERR6866639 | Other | None | ERR4811105 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6866022 | Other | None | ERR736839 | Other | None | ERR702406 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR9117709 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR8976043 | HR-TB | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9119669 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1169194 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1180996 | HR-TB | lineage4 | None | SRR1174897 | HR-TB | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173778 | Other | None | SRR19303884 | HR-TB | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR8692790 | RR-TB | lineage4 | None |
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