Rv3596c - c.2385G>T


Drug resistance types
6 Sensitive 4 RR-TB 31 HR-TB 12 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 72 Other
lineage Counts
lineage Count
lineage4.9 38
lineage4.3.4.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
M.canetti;lineage4.9 3
La3 1
lineage4.9;lineage6.3 4
La3;lineage4.9 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.6.2.2 3
La1.7;M.canetti;lineage4.9 2
lineage2.2.1 7
11
lineage4.1.2 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2 1
lineage6.3.1 1
lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9 5
lineage4.1.1.3 3
La1.7;lineage4.9;lineage7 2
La3;lineage1.1.2 1
lineage4.6.3;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage2.2.1;lineage3 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4 1
lineage3.1 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.1.2.1 2
lineage2.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.1.1.1 1
La3;lineage2.1;lineage6.3 1
La3;lineage4.8 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.2.1 1
La3;lineage2.1;lineage4.9 2
lineage4.3.3 2
lineage3.1.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.3.4.2.1 1
lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 130
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1196546 Other lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR29096900 Sensitive lineage4.3.4.2 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR1172817 Other La3 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR2514692 Other None
SRR25827682 Other None
SRR28119805 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR19295647 Sensitive lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR1184372 MDR-TB None
ERR4818347 Other lineage4.1.2 None
ERR3283042 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1180137 Other lineage2.2.1 None
SRR1196583 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR9787139 Other lineage6.3.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4817896 HR-TB lineage2.2.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR26399973 Other La3;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
ERR4819877 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816656 Other lineage4.9 None
SRR1172234 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR1184294 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR9786843 Other None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502908 HR-TB lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR4407463 HR-TB None
ERR4819241 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4818929 HR-TB lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR736817 HR-TB lineage4.3.4 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR161037 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR1196474 Other lineage3.1.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675441 Other lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR1184381 MDR-TB None
ERR212001 HR-TB None
ERR4819422 HR-TB lineage4.9 None
ERR9786604 Other None
SRR1196566 Other lineage4.9 None
SRR29096541 Other lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341373 Other lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1175074 Other None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR4820773 HR-TB lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR2446566 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None