Rv1305 - c.180T>C


Drug resistance types
8 Sensitive 2 RR-TB 107 HR-TB 3 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 46 Other
lineage Counts
lineage Count
100
lineage4.9 13
lineage3 1
lineage6.3;lineage4.9;lineage2.1 1
lineage4.1 1
lineage4.1.1.3 2
lineage4.3.4.2.1 1
lineage4 16
lineage3;lineage2.1 1
lineage4.8 2
lineage2.2.1 6
lineage4.1.2.1 11
lineage1.1 1
lineage4.3.3 1
lineage3.1 2
La1.8.1 2
La1 1
La1.2 1
lineage2.2 1
lineage2.2.2 1
lineage4.3.4 1
lineage4.3.2 1
lineage4.4.1.1 1
lineage2 1
spoligotype Counts
spoligotype Count
None 169
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR14782405 HR-TB None
SRR19295647 Sensitive lineage4.9 None
SRR17658565 Other lineage3 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR3675464 HR-TB lineage4.1 None
ERR176778 HR-TB None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR6325445 HR-TB None
ERR176779 HR-TB None
ERR1035239 HR-TB None
ERR158583 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
ERR161033 HR-TB None
SRR3675482 HR-TB None
SRR3675486 HR-TB None
SRR3675312 HR-TB lineage4 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675234 Other None
SRR3675270 HR-TB None
ERR176651 HR-TB None
ERR181824 HR-TB lineage4 None
SRR3675510 Other None
ERR181887 HR-TB None
SRR3675502 Other None
SRR3675545 HR-TB None
ERR2229062 HR-TB lineage4.8 None
ERR4816151 Other lineage4.8 None
SRR3675550 Other None
ERR212001 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816466 HR-TB None
SRR3675558 HR-TB None
ERR212125 HR-TB lineage4 None
ERR3275196 Other lineage2.2.1 nl
ERR1035162 Other None
ERR4816656 HR-TB None
ERR4818110 Sensitive lineage4.9 None
ERR4818929 HR-TB None
ERR4818607 Sensitive lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR5341418 Other None
SRR5341456 Other None
ERR2446563 Other lineage2.2.1 nl
ERR6359082 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693230 Other None
ERR2693231 Other None
ERR2693239 HR-TB None
ERR2693257 Other None
ERR2693254 Other None
ERR278594 HR-TB None
SRR6045519 HR-TB None
SRR6044780 Other lineage4.9 None
SRR6045555 HR-TB None
SRR6046210 Other lineage4 None
SRR6046133 HR-TB None
SRR6044838 Other lineage4.9 None
SRR6045233 HR-TB None
SRR6044876 Sensitive lineage4 None
SRR6045952 HR-TB None
SRR6044875 HR-TB lineage4.9 None
SRR6045053 Other None
SRR6045217 Other lineage4 None
SRR6046046 Other None
SRR6045399 Other None
SRR6046253 HR-TB lineage4.9 None
SRR6046225 HR-TB None
SRR6325442 HR-TB None
SRR6046460 HR-TB None
SRR6046299 HR-TB None
SRR6046362 HR-TB None
SRR6325444 HR-TB None
SRR6325448 HR-TB None
SRR6046514 HR-TB None
SRR6046482 HR-TB None
SRR6046492 Other None
ERR3077978 Other lineage1.1 None
SRR6046594 HR-TB lineage4 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6325447 HR-TB None
SRR6046824 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6831950 Other lineage4.3.3 None
ERR4831117 HR-TB None
ERR294248 HR-TB None
ERR5311081 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR323036 HR-TB None
ERR502889 Other None
ERR5311099 HR-TB None
ERR323041 HR-TB None
ERR5311090 HR-TB None
ERR323038 HR-TB None
ERR323045 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323055 HR-TB None
ERR323063 HR-TB None
ERR1063858 HR-TB None
ERR323108 HR-TB lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1023525 HR-TB lineage4 None
ERR1034652 Other None
ERR067681 HR-TB None
ERR1034634 HR-TB None
ERR1063862 HR-TB None
ERR3283040 HR-TB None
ERR1063859 HR-TB None
ERR108471 HR-TB lineage4 None
ERR133986 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3283017 HR-TB None
ERR3283024 Other None
ERR3445504 HR-TB None
ERR3283055 HR-TB None
ERR3439432 Other None
ERR3445503 HR-TB None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3797015 HR-TB None
ERR3468544 HR-TB None
ERR3797016 HR-TB None
ERR3797014 Other None
ERR3797036 HR-TB None
ERR3797017 Other None
ERR3797043 HR-TB None
ERR3797023 HR-TB La1.8.1 None
ERR3797046 HR-TB None
ERR3797044 Other None
ERR403298 HR-TB lineage4 None
ERR3797073 HR-TB La1.8.1 None
ERR3797061 Other None
ERR3797081 Sensitive lineage4 None
ERR3797083 HR-TB None
ERR4596910 Sensitive lineage4 None
ERR4188350 HR-TB None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4811493 HR-TB None
ERR4798262 HR-TB La1 None
ERR4798406 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4769497 HR-TB La1.2 None
ERR4799513 HR-TB lineage2.2 None
SRR069981 HR-TB lineage2.2.2 None
ERR6358837 HR-TB None
ERR736817 HR-TB lineage4.3.4 None
ERR8976043 HR-TB None
ERR736835 HR-TB None
ERR736839 Other None
ERR736875 HR-TB lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
SRR10808657 Sensitive lineage4.4.1.1 None
SRR069989 HR-TB lineage2 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1162740 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR13861305 Other lineage4.9 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1183145 Other lineage2.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1180270 Other lineage2.2.1 None
SRR13861368 RR-TB lineage4.9 None
SRR13861413 Sensitive lineage4.9 None
SRR13861549 RR-TB lineage4.9 None