Rv0668 - c.1216_1218delCTCinsTG
Drug resistance types
4 Sensitive
3 RR-TB
15 HR-TB
10 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 18 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 3 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6.1.2 | 1 |
| lineage2.2.1 | 4 |
| La2;lineage2.2 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage3 | 2 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| 1 | |
| lineage2.2 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.6.1.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.8 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 49 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9119669 | MDR-TB | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR13423649 | Other | lineage2.2.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR7535086 | Other | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR5341373 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None |
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