lineage | Count |
---|---|
lineage4.9 | 12 |
lineage2.2.1 | 2 |
lineage4.9;lineage7 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
lineage1;lineage4.9 | 1 |
La1.7.1;La1.7.X-unk4 | 1 |
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
M.canetti;lineage4.2 | 1 |
lineage2.2.1.1 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
La1.7.1;lineage4.9 | 1 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
lineage4.3.4 | 1 |
La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 31 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR176779 | HR-TB | lineage4.9 | None |
ERR4800527 | MDR-TB | lineage2.2.1 | None |
ERR3445502 | Sensitive | lineage4.9;lineage7 | None |
ERR736875 | HR-TB | lineage4.9 | None |
SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
ERR323045 | HR-TB | lineage1;lineage4.9 | None |
ERR181887 | Other | lineage4.9 | None |
ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None |
ERR1063846 | HR-TB | lineage4.9 | None |
ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
ERR1063862 | HR-TB | lineage4.9 | None |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
ERR212125 | HR-TB | lineage4.9 | None |
SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
SRR1183106 | RR-TB | lineage2.2.1.1 | None |
ERR181824 | HR-TB | lineage4.9 | None |
ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None |
ERR212138 | HR-TB | lineage4.9 | None |
ERR1063849 | HR-TB | lineage4.9 | None |
ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None |
SRR1180270 | Other | lineage2.2.1 | None |
ERR176778 | HR-TB | lineage4.9 | None |
ERR1063858 | HR-TB | lineage4.9 | None |
ERR176651 | Other | lineage4.9 | None |
ERR736817 | HR-TB | lineage4.3.4 | None |
ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |