lineage | Count |
---|---|
46 | |
lineage3.1.2 | 8 |
lineage3 | 1 |
lineage4 | 11 |
lineage4.1.1.3.1;lineage3.1.2 | 1 |
lineage4.9 | 5 |
La2 | 1 |
lineage2.2 | 2 |
lineage4.4.1.2 | 1 |
lineage4.3.4 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.6.1.1 | 1 |
lineage1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 80 |
ID | Drug resistance | Lineage | Country iso2 | ERR176651 | HR-TB | None | ERR176740 | HR-TB | None | ERR181887 | HR-TB | None | ERR4818424 | Sensitive | lineage3.1.2 | None | ERR4816326 | Sensitive | lineage3 | None | ERR212138 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4818555 | Sensitive | lineage3.1.2 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | SRR5341470 | HR-TB | None | ERR2693231 | Other | None | ERR2693257 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | SRR6046594 | HR-TB | lineage4 | None | ERR4799828 | MDR-TB | lineage3.1.2 | in | SRR6046460 | HR-TB | None | ERR323039 | HR-TB | None | ERR4816795 | Sensitive | lineage3.1.2 | gb | ERR502524 | HR-TB | La2 | None | ERR294266 | HR-TB | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1034634 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR2512820 | Sensitive | lineage3.1.2 | gb | ERR2513132 | Sensitive | lineage3.1.2 | gb | ERR3283021 | HR-TB | None | ERR3283024 | Other | None | ERR3445501 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797017 | Other | None | ERR3445503 | HR-TB | None | ERR3797014 | Other | None | ERR3797010 | Sensitive | lineage4.9 | None | ERR3797044 | Other | None | ERR3797043 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR3797061 | Other | None | ERR3797081 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR2514426 | Sensitive | lineage3.1.2 | gb | ERR736848 | HR-TB | None | ERR987722 | HR-TB | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1172310 | HR-TB | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | SRR3675234 | Other | None | ERR176778 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None |
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