Rv2428 - c.387T>C
Drug resistance types
6 Sensitive
4 RR-TB
110 HR-TB
4 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1 | 1 |
| lineage4.9 | 23 |
| lineage4.9;La3 | 1 |
| 94 | |
| lineage4.1.1 | 2 |
| lineage2.2.1 | 7 |
| lineage4.3.4 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4 | 12 |
| lineage3 | 4 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage2 | 1 |
| lineage2.2 | 4 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1.2.1 | 7 |
| lineage4.1.2 | 1 |
| La1.8.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| La2 | 1 |
| lineage4.7 | 1 |
| lineage4.1.3 | 2 |
| La1.3 | 3 |
| lineage2 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2 | 2 |
| lineage1.1.2 | 1 |
| lineage4.5 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 185 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675464 | HR-TB | lineage4.1 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR6325445 | HR-TB | None | SRR3675465 | HR-TB | None | ERR1035239 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR181744 | HR-TB | None | ERR161033 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR176568 | Other | lineage4.3 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675311 | Other | None | ERR176751 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675572 | Other | None | ERR212123 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816466 | HR-TB | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816585 | Other | lineage2.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | SRR7496472 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR4035722 | Other | lineage4.1.2 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818929 | HR-TB | None | ERR4818615 | Other | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2514821 | Other | lineage2.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341333 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR5341330 | HR-TB | None | ERR2693254 | Other | None | ERR2693239 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR278594 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046397 | Other | None | SRR6325444 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6046644 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831117 | HR-TB | None | ERR323036 | HR-TB | None | ERR294266 | HR-TB | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR7496517 | Other | None | ERR5311081 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323043 | HR-TB | None | ERR067712 | HR-TB | lineage4 | None | ERR323063 | HR-TB | None | ERR3283017 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063862 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797014 | Other | None | ERR3797016 | HR-TB | None | ERR4407463 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797069 | Other | None | ERR3797083 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797036 | HR-TB | None | ERR3797071 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR4769514 | Other | La1.3 | None | ERR4769408 | Other | La1.3 | None | ERR4769457 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4769555 | Other | La1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4811493 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800341 | Other | lineage3 | None | ERR5336148 | Other | None | ERR6358837 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6358991 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR702406 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736839 | Other | None | ERR736835 | HR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR736867 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR736875 | HR-TB | lineage4 | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR736874 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9786604 | Other | None | ERR9786421 | Other | lineage4.1.2.1 | None | SRR069989 | HR-TB | lineage2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR10808805 | Sensitive | None | SRR1167384 | Other | lineage4 | None | SRR13861324 | Other | lineage4.9 | None | SRR1169194 | Other | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR14782405 | HR-TB | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR19303884 | HR-TB | None |
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