Rv0667 - c.2041_2043delTGCinsCT
Drug resistance types
11 Sensitive
1 RR-TB
61 HR-TB
1 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2.1 | 1 |
| lineage4.9 | 73 |
| La1.7;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.2 | 2 |
| lineage1.1.3.1 | 1 |
| 1 | |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage2.2.1 | 5 |
| M.canetti;lineage1 | 1 |
| La1;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.9;lineage7 | 2 |
| La1.7.1;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.3.4 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 110 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4769452 | Other | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR1063896 | HR-TB | None | ERR137286 | Other | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR926165 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | ERR3797029 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR6045053 | Other | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR5341461 | HR-TB | lineage4.9 | None |
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