Rv0006 - c.219G>C


Drug resistance types
24 Sensitive 1 RR-TB 26 HR-TB 3 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 25 Other
lineage Counts
lineage Count
lineage4.9 37
lineage3.1.2.1;lineage4 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.3.4 1
La3;lineage4 1
La1.7;lineage4.9 3
La1.6;La3;lineage4.9 1
lineage4.3.2 1
La3;lineage4.9 8
La1.7.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.9;lineage7 1
lineage4.9;lineage6.1.3 1
lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.2.1 1
La1.7.1;La1.7.X-unk4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.6.3;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.1.2.1 1
lineage1.1.2 1
La1.6 1
spoligotype Counts
spoligotype Count
None 80
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1063858 HR-TB lineage4.9 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
ERR926155 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR3283028 Other La3;lineage4 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR10112895 MDR-TB lineage4.3.2 None
ERR736848 Other lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR29096717 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR29096276 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR1063846 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR3797046 HR-TB lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR9119669 HR-TB lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR4797193 HR-TB lineage1.1.2 None
ERR11268038 Other La1.6 None
ERR4811493 HR-TB lineage4.9 None