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SRA data
Rv0529
- c.552G>C
Drug resistance types
5 Sensitive
1 RR-TB
10 HR-TB
5 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
15 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
15
lineage2.2.1
3
lineage4.1.2
2
La2;lineage4.9
2
2
lineage2.1;lineage4.9;lineage6.3
1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
1
lineage4.3.4
1
La2;lineage2.2
1
lineage2.1;lineage4.3.2;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
39
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063846
HR-TB
lineage4.9
None
ERR1063857
MDR-TB
La2;lineage4.9
None
ERR11081992
MDR-TB
lineage2.2.1
None
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR11252599
Other
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
None
ERR124636
Sensitive
lineage4.9
None
ERR2514692
Other
None
ERR323039
HR-TB
La2;lineage4.9
None
ERR3273109
HR-TB
lineage4
None
Showing 1 to 10 of 39 entries
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