Rv1484 - c.-538A>C
Drug resistance types
25 Sensitive
2 RR-TB
127 HR-TB
14 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
83 Other
lineage Counts
| lineage | Count |
|---|---|
| 149 | |
| lineage4 | 28 |
| lineage4.9 | 19 |
| lineage2.2 | 7 |
| lineage5.2 | 2 |
| lineage2.2.1 | 8 |
| lineage4.1.1 | 2 |
| La2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.1.2.1 | 8 |
| La1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2 | 2 |
| lineage3.1.2 | 1 |
| lineage3 | 1 |
| lineage4.3.4 | 2 |
| lineage4.6.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage6.3.1 | 1 |
| lineage4.3.3 | 1 |
| lineage3.1 | 2 |
| lineage2.1 | 2 |
| La1.8.1 | 2 |
| lineage4.5 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.9;La1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.8 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 258 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046540 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6046824 | HR-TB | None | ERR4831117 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6982388 | Sensitive | lineage4.1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6789626 | Other | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502524 | HR-TB | La2 | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | ERR502889 | Other | None | SRR8217918 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7496509 | Other | None | SRR7496517 | Other | None | SRR7535082 | Sensitive | lineage4 | None | ERR323039 | HR-TB | None | SRR7535086 | Other | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323043 | HR-TB | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1035157 | Other | lineage4.9 | None | ERR323085 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1035122 | Sensitive | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR3283014 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283027 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797069 | Other | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR403298 | HR-TB | lineage4 | None | ERR4407463 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4769521 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798406 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797474 | Other | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR5336148 | Other | None | ERR6359045 | HR-TB | None | ERR6866410 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6358991 | HR-TB | None | ERR702406 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736848 | HR-TB | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119669 | HR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9787197 | Other | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1172234 | Other | None | SRR10809074 | Sensitive | lineage4 | None | SRR1169194 | Other | None | SRR1173153 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1172310 | HR-TB | None | SRR1173363 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1184381 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196768 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196546 | HR-TB | None | SRR12142341 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR15368973 | Other | None | SRR12416824 | HR-TB | None | SRR14801749 | Sensitive | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19304036 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR20970016 | Other | lineage2.2 | None | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | ERR2229084 | Sensitive | lineage4.8 | dk | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675488 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675222 | Other | None | SRR3675236 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675311 | Other | None | SRR3675501 | HR-TB | None | SRR3675502 | Other | None | SRR3675510 | Other | None | ERR212123 | Other | None | ERR2027263 | Other | lineage4 | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | ERR4816999 | Other | None | ERR4817037 | Other | lineage4.9 | None | SRR3675571 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675572 | Other | None | ERR212121 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3742665 | HR-TB | None | SRR7496472 | Other | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818021 | Other | La1.8.1 | None | ERR1035162 | Other | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR234659 | HR-TB | None | ERR4818615 | Other | None | ERR4818929 | HR-TB | None | SRR5341418 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR1035138 | MDR-TB | None | ERR4819932 | Other | lineage4.7 | None | ERR2514692 | Other | None | SRR6045503 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341470 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044838 | Other | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6045233 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046046 | Other | None | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | SRR6046305 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046397 | Other | None |
|---|
