EBG00000313339 - n.154C>A
Drug resistance types
11 Sensitive
2 RR-TB
29 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| 20 | |
| lineage3 | 3 |
| lineage2.2.1 | 7 |
| lineage4.1.1 | 1 |
| lineage4.9 | 4 |
| lineage4.7 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4 | 8 |
| lineage2.2 | 1 |
| lineage4.1.1.2 | 2 |
| lineage4.3.4 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.8 | 1 |
| lineage3.1.1 | 1 |
| lineage4;lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 54 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341456 | Other | None | ERR3275709 | HR-TB | lineage3 | nl | ERR2513259 | Other | lineage3 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | SRR6046299 | HR-TB | None | SRR6045480 | Other | lineage4.1.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR9971290 | Sensitive | lineage4.1.2.1 | None | SRR7496471 | Sensitive | None | ERR1063858 | HR-TB | None | ERR323045 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR5908144 | Sensitive | lineage4.1.1.2 | None | ERR3445503 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR1063859 | HR-TB | None | ERR3445504 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR7801190 | Sensitive | lineage4.6.1.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR9119669 | HR-TB | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | SRR16295790 | Other | lineage2.2.1 | None | SRR18337409 | Sensitive | lineage4.8 | None | SRR19428614 | HR-TB | lineage3.1.1 | None | ERR176779 | HR-TB | None | SRR8692897 | Other | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692871 | Other | lineage4.9 | None | ERR176778 | HR-TB | None | ERR1577246 | Sensitive | lineage2.2.1 | None | ERR176651 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR1750909 | RR-TB | lineage4.1.1.2 | None | ERR181887 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4816470 | Other | lineage3 | None |
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