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SRA data
EBG00000313339
- n.2104_2106delCGCinsGT
Drug resistance types
13 Sensitive
4 RR-TB
31 HR-TB
21 MDR-TB
8 Pre-XDR-TB
3 XDR-TB
139 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
43
18
lineage2.2.1
17
lineage4.1.2.1
10
lineage2.1;lineage4.9
10
lineage4.8
8
lineage4.1.1.3
8
lineage4.9;lineage6.3
7
La3;lineage4.9
7
lineage2.1;lineage4.9;lineage6.3
7
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
219
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023302
MDR-TB
La3;lineage3
None
ERR1035157
Other
lineage4.9
None
ERR11049020
Other
lineage4.8
None
ERR11068570
Other
lineage4
None
ERR11081257
Other
lineage4.8
None
ERR11081258
Other
lineage4.8
None
ERR11138607
Pre-XDR-TB
lineage2.2.1
None
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR11252612
Other
La3;lineage4.9
None
ERR11252664
Other
lineage2.2.1
None
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