EBG00000313339 - n.2104_2106delCGCinsGT


Drug resistance types
12 Sensitive 4 RR-TB 33 HR-TB 19 MDR-TB 8 Pre-XDR-TB 3 XDR-TB 134 Other
lineage Counts
lineage Count
lineage2.2.1 17
lineage4.9 39
17
lineage4.9;lineage6.3 7
La3;lineage4.9 7
lineage2.1;lineage4.9 10
lineage1.1.1 1
lineage4.3.3;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 8
lineage4.8 7
lineage4.1.2.1 10
La3;lineage4.8 2
La3;M.canetti;lineage2.2.1 1
La3;lineage2 1
La3;lineage2.2.1 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.1.3 8
lineage1.1.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage3 5
lineage4.3.4.2.1 3
M.canetti;lineage4.9 1
lineage2.2.2 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1;lineage4.9 1
lineage4.1.3 2
lineage2.2.1;lineage3 2
lineage4.6.2.2 2
lineage4.8;lineage4.9 1
lineage4.8.1 1
lineage2.1 3
La3;lineage2.1;lineage4.9 3
lineage3.1 1
lineage2.2.2;lineage4 1
M.canetti;lineage2.2 2
lineage6.2.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2 2
lineage4.3.3 3
La3;M.canetti;lineage4.9 2
lineage3.1.1 1
lineage2.2.1;lineage3;lineage4 1
lineage4.3.4.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7;lineage4.2 1
lineage4.1.1.1 3
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
La3;lineage2.1;lineage6.3 1
lineage6.3.1 1
lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage3 1
La3;lineage2.2.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4 1
lineage1.2.2.2 1
La3 2
La1.2 1
lineage4.6.3;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 213
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6785227 Other lineage2.2.1 None
SRR1173633 Other lineage4.9 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR1173363 Other None
ERR4815752 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR21690362 Other lineage1.1.1 None
SRR1173330 Sensitive lineage4.3.3;lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR1196583 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
SRR18213713 HR-TB None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR1169194 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR5341332 Pre-XDR-TB lineage3 None
SRR1165628 Other La3;lineage4.9 None
ERR11466242 Sensitive lineage4.1.1.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR1184312 Other lineage2.2.1 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR13423649 Sensitive lineage2.2.1 None
SRR6045219 HR-TB lineage4.9 None
ERR11465665 Other lineage4.1.1.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
SRR23961542 Other La1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR11049020 Other lineage4.8 None
ERR2446570 Sensitive lineage4.8 nl
SRR25827856 MDR-TB lineage2.2.1;lineage3 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR1175049 Other lineage4.8;lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1172234 Other lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1184294 Other lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR1173118 Other lineage2.2.1 None
ERR11252612 Other La3;lineage4.9 None
SRR25827682 Other None
SRR1172857 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR12142341 HR-TB lineage2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
ERR11466339 RR-TB lineage2.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
SRR1172951 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196768 MDR-TB None
ERR9787061 Sensitive lineage6.2.3 None
SRR1173562 Sensitive lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR2199988 MDR-TB lineage4.1.1.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1175074 Other None
ERR4817896 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1173384 Other lineage4.9 None
ERR11489020 MDR-TB lineage2.2.1 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR3675248 Other lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR11466174 Other lineage4.8 None
ERR11465025 Other lineage4.1.1.3 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
ERR702406 Other lineage2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675549 Other lineage4.9 None
SRR1173400 Other lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
SRR7496509 Other None
ERR12015083 Other La3;lineage4.8 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675311 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR1184381 MDR-TB None
SRR28351341 Other lineage4.1.1.1 None
SRR28044634 Other lineage3 None
ERR212001 HR-TB None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR1173153 Other lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR3470647 Other lineage3 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR3275201 Sensitive lineage4.8 nl
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR22249687 Sensitive lineage4.8 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR1173788 Sensitive lineage4.9 None
SRR29772570 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR1173355 Other lineage4.9 None
SRR1196677 Other lineage2.2 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1173218 Other lineage4.3.3 None
SRR1181020 Other lineage2.2.1 None
ERR1023302 MDR-TB La3;lineage3 None
SRR3675448 Other lineage4.9 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR26159043 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
SRR6789626 Other None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
ERR990545 Other lineage3 None
ERR11081258 Other lineage4.8 None
ERR4797201 Other lineage1.2.2.2 None
ERR4800341 Other lineage3 None
SRR1172728 RR-TB La3 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR1172817 Other La3 None
SRR6785527 Sensitive lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR23961549 Other La1.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR3804155 Other lineage4.1.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR11252664 Other lineage2.2.1 None
ERR212033 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR21690574 Other lineage4.1.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1184372 MDR-TB None