Rv2447c - p.Glu153Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
28 HR-TB
51 MDR-TB
73 Pre-XDR-TB
17 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 75 |
| lineage4.1.2.1 | 14 |
| lineage3 | 6 |
| lineage1.1.3 | 2 |
| lineage2.2.2 | 14 |
| lineage4.1.1.1 | 21 |
| lineage4.8 | 6 |
| lineage2.2.1.1 | 4 |
| lineage4.2.2.2 | 7 |
| lineage4.9 | 4 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2 | 4 |
| lineage1.1.2 | 3 |
| lineage4.2.2.1 | 1 |
| lineage4.2.1.1 | 8 |
| lineage4.5 | 3 |
| lineage1.1.3.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 176 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4822335 | XDR-TB | lineage2.2.1 | None | SRR28706427 | MDR-TB | lineage2.2.1 | None | ERR5863848 | MDR-TB | lineage2.2.1 | None | ERR4817790 | HR-TB | lineage4.1.2.1 | None | ERR13264956 | Pre-XDR-TB | lineage3 | None | SRR11972442 | MDR-TB | lineage1.1.3 | None | SRR11662281 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786321 | HR-TB | lineage4.1.2.1 | None | ERR13258505 | MDR-TB | lineage2.2.1 | None | SRR14801595 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865878 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865879 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993215 | XDR-TB | lineage2.2.2 | None | SRR1181115 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR25207112 | MDR-TB | lineage2.2.2 | None | SRR16089545 | HR-TB | lineage4.8 | None | SRR25827344 | XDR-TB | lineage2.2.1.1 | None | SRR25207335 | MDR-TB | lineage2.2.1 | None | SRR1180425 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR30182490 | HR-TB | lineage2.2.1 | None | SRR11972356 | HR-TB | lineage2.2.1.1 | None | ERR13291263 | HR-TB | lineage4.8 | None | ERR4797491 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR1165245 | Pre-XDR-TB | lineage2.2.2 | None | ERR4028193 | Other | lineage4.9 | None | ERR10680094 | MDR-TB | lineage4.1.2.1 | None | ERR8665648 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287356 | MDR-TB | lineage4.1.1.3 | pe | ERR11773755 | Pre-XDR-TB | lineage2.2.2 | None | ERR4810983 | MDR-TB | lineage2.2.2 | cn | ERR4811352 | MDR-TB | lineage2.2.1 | cn | ERR8665923 | Pre-XDR-TB | lineage2.2.1 | None | ERR8976071 | XDR-TB | lineage2.2.2 | None | SRR6824292 | MDR-TB | lineage2.2.1 | cn | SRR18715062 | MDR-TB | lineage2.2.1 | None | SRR29440983 | HR-TB | lineage2.2.1.1 | None | ERR13291028 | MDR-TB | lineage2.2.1 | None | SRR1180200 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR9786186 | HR-TB | lineage4.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR15014647 | MDR-TB | lineage3.1.2 | None | SRR25534200 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256100 | MDR-TB | lineage2.2.1 | None | ERR8665572 | Pre-XDR-TB | lineage2.2.1 | None | SRR15222187 | HR-TB | lineage1.1.2 | None | SRR24710212 | MDR-TB | lineage2.2.1 | None | ERR4831167 | XDR-TB | lineage2.2.1 | de | ERR4829386 | Pre-XDR-TB | lineage2.2.1 | it | ERR2516575 | MDR-TB | lineage4.2.2.1 | None | ERR7975683 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632777 | XDR-TB | lineage2.2.1 | None | SRR833150 | MDR-TB | lineage4.1.1.1 | None | SRR16089631 | HR-TB | lineage4.8 | None | SRR1019163 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR4800132 | HR-TB | lineage3 | None | SRR24256179 | MDR-TB | lineage2.2.1 | None | ERR13264959 | Pre-XDR-TB | lineage3 | None | SRR1183146 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR13291306 | HR-TB | lineage4.8 | None | ERR4011071 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786968 | HR-TB | lineage4.1.2.1 | None | ERR9786943 | HR-TB | lineage4.1.2.1 | None | SRR21887735 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827352 | MDR-TB | lineage1.1.2 | None | ERR11082958 | MDR-TB | lineage4.1.2.1 | None | SAMN02053762 | MDR-TB | lineage4.1.1.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR11972396 | MDR-TB | lineage2.2.1.1 | None | ERR5863847 | MDR-TB | lineage2.2.1 | None | ERR2510698 | MDR-TB | lineage4.5 | pk | SRR15316024 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798598 | Pre-XDR-TB | lineage3.1.2 | in | ERR4798185 | XDR-TB | lineage4.2.2.2 | in | SRR6484981 | HR-TB | lineage4.2.1.1 | None | ERR4028199 | Other | lineage4.9 | None | ERR4811324 | Pre-XDR-TB | lineage2.2.1 | cn | ERR8665647 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510659 | MDR-TB | lineage2.2.1 | it | SRR1180436 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR551989 | Other | lineage4.5 | de | ERR551807 | MDR-TB | lineage4.1.2.1 | None | ERR2517088 | MDR-TB | lineage4.1.2.1 | gb | ERR4818221 | HR-TB | lineage4.2.1.1 | gb | SRR28351542 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR11662491 | MDR-TB | lineage1.1.3.3 | None | SRR1184020 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR1723546 | MDR-TB | lineage2.2.1 | None | SAMN02350487 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR5758336 | Pre-XDR-TB | lineage2.2.2 | None | ERR13261376 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827424 | MDR-TB | lineage1.1.2 | None | ERR11043392 | MDR-TB | lineage2.2.1 | None | ERR9786516 | HR-TB | lineage4.1.2.1 | None | ERR4797121 | XDR-TB | lineage3.1.2 | in | ERR4797191 | XDR-TB | lineage2.2.1 | in | ERR4810482 | Pre-XDR-TB | lineage2.2.2 | cn | ERR13273077 | Pre-XDR-TB | lineage2.2.1 | None | ERR4028200 | Other | lineage4.9 | None | ERR7361980 | Pre-XDR-TB | lineage2.2.2 | None | ERR9786666 | HR-TB | lineage4.1.2.1 | None | ERR13264935 | MDR-TB | lineage2.2.1 | None | SRR833035 | MDR-TB | lineage4.1.1.1 | None | SRR10828641 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829040 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181326 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR13262045 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869238 | Pre-XDR-TB | lineage2.2.2 | None | SRR6257057 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207233 | MDR-TB | lineage2.2.2 | None | SRR26937089 | MDR-TB | lineage2.2.1 | None | SRR29772597 | MDR-TB | lineage4.8 | None | ERR13281459 | MDR-TB | lineage2.2.1 | None | ERR13276014 | HR-TB | lineage4.2.1.1 | None | SRR1181173 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR13232454 | MDR-TB | lineage2.2.1 | None | SRR29341538 | MDR-TB | lineage2.2.1 | None | ERR3794412 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181142 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR6832694 | Pre-XDR-TB | lineage2.2.1 | None | ERR13249432 | Other | lineage2.2.1 | None | SRR23938607 | MDR-TB | lineage2.2.1 | None | SRR29051394 | MDR-TB | lineage2.2.1 | None | SRR29289341 | Pre-XDR-TB | lineage3 | None | SRR29289342 | Pre-XDR-TB | lineage3 | None | ERR13261100 | XDR-TB | lineage4.2.2.2 | None | SRR6964562 | Other | lineage3 | None | SRR25207271 | MDR-TB | lineage2.2.1 | None | ERR9786138 | HR-TB | lineage4.1.2.1 | None | SRR11972439 | MDR-TB | lineage1.1.3 | None | ERR4798120 | XDR-TB | lineage4.2.2.2 | in | ERR4797157 | MDR-TB | lineage4.2.2.2 | in | ERR4797648 | XDR-TB | lineage4.2.2.2 | in | ERR4813184 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799793 | XDR-TB | lineage4.2.2.2 | in | SRR7829579 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181354 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR8025482 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068766 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798362 | Pre-XDR-TB | lineage3.1.2 | in | ERR987772 | HR-TB | lineage4.9 | None | SRR29385434 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257086 | MDR-TB | lineage4.2.1.1 | ru | ERR3639720 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02585974 | Pre-XDR-TB | lineage4.1.1.1 | za | SAMN02585971 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR4810576 | MDR-TB | lineage2.2.2 | cn | SRR671799 | Pre-XDR-TB | lineage2.2.1 | cn | SRR28467065 | HR-TB | lineage2.2.1 | None | SRR11662258 | HR-TB | lineage4.5 | None | SRR28240210 | MDR-TB | lineage2.2.1 | None | ERR8665567 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828710 | MDR-TB | lineage2.2.1 | None | DRR188809 | Other | lineage2.2.1 | None | SRR8847005 | Pre-XDR-TB | lineage2.2.1 | None | SRR1140938 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR8975744 | XDR-TB | lineage2.2.2 | None | SRR25206925 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257105 | MDR-TB | lineage2.2.1 | ru | SAMN02585968 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR11798649 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR25207263 | Pre-XDR-TB | lineage2.2.2 | None | DRR130092 | MDR-TB | lineage2.2.1 | None | ERR4818954 | HR-TB | lineage4.2.1.1 | None | SRR1183131 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR3794507 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832510 | HR-TB | lineage4.2.1.1 | None | SRR21276944 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4796484 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR4796700 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797457 | XDR-TB | lineage4.8 | in | ERR4797965 | XDR-TB | lineage2.2.1 | in | ERR4796447 | XDR-TB | lineage2.2.1 | in | SRR8366603 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310845 | HR-TB | lineage2.2.1 | None | ERR2510254 | Pre-XDR-TB | lineage2.2.1 | it | SRR1180201 | Pre-XDR-TB | lineage4.1.1.1 | None |
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