lineage | Count |
---|---|
La1.8.1 | 6 |
lineage2.2.1 | 2 |
La2;lineage4.9 | 1 |
lineage4.9 | 8 |
lineage4.9;lineage9 | 2 |
La2;lineage4.9;lineage9 | 1 |
1 | |
lineage4.3.2;lineage4.9 | 1 |
lineage4.9;lineage6.1.3 | 1 |
lineage6.1.1 | 2 |
La1.7.X-unk4;lineage4.9 | 1 |
lineage3 | 2 |
lineage3.1.2.2 | 1 |
lineage2.1;lineage4.1.4;lineage4.9 | 1 |
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage2.2.1.1 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 36 |
ID | Drug resistance | Lineage | Country iso2 | SRR5657525 | Other | La1.8.1 | mx | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR5657499 | Other | La1.8.1 | mx | SRR5341330 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR5657471 | Other | La1.8.1 | mx | SRR29096276 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR5657506 | Other | La1.8.1 | mx | SRR14296104 | Other | La1.8.1 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR14296171 | Other | La1.8.1 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6045555 | Other | lineage4.9 | None | SRR29096203 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None |
---|